Gene Bcen_3325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3325 
Symbol 
ID4093938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp410925 
End bp411767 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content68% 
IMG OID638016624 
Product5-carboxymethyl-2-hydroxymuconate delta-isomerase 
Protein accessionYP_623193 
Protein GI107025682 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.578271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGC TGAGATTTGG CGACAAACAC CATGAAAAGC CGGGCCTGCT CGATGCGCAG 
GGCCACATTC GCGACCTGTC CGGCGTGATC GACGACATCG CCGGCGACGC GCTGACGCCT
GCGTCGCTCG CGCGGCTGCG CGACATTCCG CCTTCGTCGC TGCCGCTCGT CGAAGGCACG
CCGCGGCTCG GCGCGTGCGT CGGCCGTGTC GGCAAGTTCA TCTGCATCGG CCTCAACTAT
TCCGACCACG CGGCCGAATC GGGGATGGAG GTGCCGAAGG AGCCCGTCGT GTTCGGCAAG
TGGACGAGCG CGATCTCGGG CCCGAACGAC GACGTCGAGA TCCCGCGCGG CTCGGAGAAG
ACCGACTGGG AAGTCGAACT TGGCGTGGTG ATCGGCCAGG GCGGCCGCTA TATCGACGAA
GCCGATGCGC TGTCGCACGT CGCCGGCTAC TGCGTCGTGA ACGACGTGTC GGAGCGCGAA
TACCAGCTCG AACGCGGCGG CACGTGGGAC AAGGGCAAGG GCAACGACAC GTTCGGCCCG
ATCGGCCCGT GGCTCGTGAC GGCCGACGAA GTGCCCGATC CGCACGCGCT GCGGCTGTGG
CTCGAGGTGG ACGGCCACCG CTACCAGAAC GGCACGACCG CGACGATGGT GTTTCGCGTG
CCGCACCTGA TCAGCTACCT GAGCCGTTTC ATGAGCCTGC AGCCGGGCGA CGTGATCTCG
ACCGGCACGC CGCCTGGCGT CGGCCTTGGA CAGAAGCCGC CCGTCTACCT GCGCGCCGGA
CAGGTGATCA CGCTCGGCAT CGACGGGCTC GGCGAGCAGC GCCAGCGTAC CGTGCAGGCC
TGA
 
Protein sequence
MKLLRFGDKH HEKPGLLDAQ GHIRDLSGVI DDIAGDALTP ASLARLRDIP PSSLPLVEGT 
PRLGACVGRV GKFICIGLNY SDHAAESGME VPKEPVVFGK WTSAISGPND DVEIPRGSEK
TDWEVELGVV IGQGGRYIDE ADALSHVAGY CVVNDVSERE YQLERGGTWD KGKGNDTFGP
IGPWLVTADE VPDPHALRLW LEVDGHRYQN GTTATMVFRV PHLISYLSRF MSLQPGDVIS
TGTPPGVGLG QKPPVYLRAG QVITLGIDGL GEQRQRTVQA