Gene Bcen_3278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3278 
Symbol 
ID4096089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp358537 
End bp359733 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content67% 
IMG OID638016577 
Productalcohol dehydrogenase GroES-like protein 
Protein accessionYP_623146 
Protein GI107025635 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR02819] formaldehyde dehydrogenase, glutathione-independent 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.240401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCA ATCGAGGTGT CGTCTATCTT GGGCCGGGCC AGGTCGAAGT CCAGAAAATC 
GATTATCCGA AGATGGTCGA CCCAAGCGGC CGCGCGATCG GCCACGGCGT GATCCTGAAA
GTGGTCAGCA CGAACATCTG CGGCTCCGAC CAGCACATGG TGCGCGGCCG TACGACCGCG
CCGGTCGGCC TCGTGCTCGG TCACGAGATC ACCGGCGAAG TGGTCGAGGT GGGCCGCGAC
GTCGAGACGC TGAAGCTCGG CGATCTCGTG TCGGTGCCGT TCAACGTCGC GTGCGGCCGC
TGCGCGATGT GCAAGGACAC GCACACCGGC GTGTGCCTGA ACGTGAACCC GTCGCGTGCC
GGCGGCGCGT ACGGCTACGT CGACATGGGC GGCTGGATCG GCGGCCAGGC CGAGTACGTG
CTCGTGCCGT ATGCCGATTT CAACCTGCTG AAATTCCCGG ATCGCGATCA GGCGATGGCG
AAGATCCGCG ACCTGACCTG CCTGTCCGAC ATCCTGCCGA CCGGTTATCA CGGCGCGGTG
AGCGCGGGCG TGAAGCCCGG TTCGACGGTC TATATCGCGG GCGCGGGCCC GGTCGGGATG
GCGGCGGCCG CGTCGGCGCG CCTGCTCGGC GCGGCCGTGA CGATCGTCGG CGACATGAAC
GCGGAACGCC TCGCGCATGC GCGGGCGATG GGGTTCGAGA CGGTCGACCT GTCGAAGGAC
GCGTCGCTCG GCGAGCAGAT CGAGCAGATC CTCGGTGTGC CCGAGATCGA TTGCGCGGTC
GACTGCGTCG GCTTCGAGGC GCACGGTCAC GGCTCGTCGG GCCATTCGGA GGAAGCGCCC
GCGACGGTGC TGAACTCGCT GATGGAAATC ACGCGCCCGG CCGGCGCGAT CGGCATCCCG
GGCCTGTACG TGACGGACGA TCCGGGTGCG AAGGACAAGG CCGCGCAGCA CGGCAGCCTG
AGCATCCGCT TCGGCCTCGG CTGGGCGAAG TCGCATTCGT TCTTCACGGG CCAGACGCCG
GTGCTGAAGT ACAACCGCAA CCTGATGCAG GCGATCCTGT TCGACCGGCT GCCGATCGCG
AAGATCGTCA ACGTCGAAGT GATCTCGCTC GACCAGGCGC CGGAAGGCTA CAAGAAGTTC
GACGGCGGTG CGCCGCGCAA ATTCGTCATC GACCCGCACG GGTTGCTGGC GGCGTGA
 
Protein sequence
MSSNRGVVYL GPGQVEVQKI DYPKMVDPSG RAIGHGVILK VVSTNICGSD QHMVRGRTTA 
PVGLVLGHEI TGEVVEVGRD VETLKLGDLV SVPFNVACGR CAMCKDTHTG VCLNVNPSRA
GGAYGYVDMG GWIGGQAEYV LVPYADFNLL KFPDRDQAMA KIRDLTCLSD ILPTGYHGAV
SAGVKPGSTV YIAGAGPVGM AAAASARLLG AAVTIVGDMN AERLAHARAM GFETVDLSKD
ASLGEQIEQI LGVPEIDCAV DCVGFEAHGH GSSGHSEEAP ATVLNSLMEI TRPAGAIGIP
GLYVTDDPGA KDKAAQHGSL SIRFGLGWAK SHSFFTGQTP VLKYNRNLMQ AILFDRLPIA
KIVNVEVISL DQAPEGYKKF DGGAPRKFVI DPHGLLAA