Gene Bcen_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3259 
Symbol 
ID4095679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp334684 
End bp336108 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content71% 
IMG OID638016558 
Productmajor facilitator transporter 
Protein accessionYP_623127 
Protein GI107025616 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.331503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCCG CCACCGCTCC CGCCTCCGCC GCCGCCCGGC TCGAACGCCT GCCGTTCTCC 
GGCTATCACA AGCGCATCTT CTTCATCATC GCGATCGCGT TCTTCTTCGA CTCGGTCGAT
CTCGGCACGA TGACGTTCGT GCTCGGCTCG ATCCGCAAGG AGTTCGGGCT GTCGACCGCC
GCCGCCGGCC TCGTCGCGAG CGCGAGCTTC TTCGGGATGG TGCTGGGCGC GGCGGTAGCC
GGCCTGCTCG CCGACCGTTT CGGCCGCCGG CCCGTGTTCC AGTGGAGCAT GGTGCTGTGG
GGCGCCGCGT CGTACCTGTG CTCGACCGCG CAGAGCGTCG ACGCGCTGAT CGTCTACCGC
GTGCTGCTCG GCATCGGGAT GGGGATGGAG TTTCCGGTCG CGCAGACGCT GCCGTCCGAA
TTCGTGCCGA CCGAGAAGCG CGGCCGCCTG ATCGCGCTGA TGGACGGCTT CTGGCCGCTC
GGCTTCATCA CGGCCGGCAT CGTCGCGTAT TTCGTGCTGC CGCAGTTCGG CTGGCGCACC
GTGTTCGCGC TGCTCGCGAT TCCGGCCGTG TTCGTGCTCG TCGTGCGCCG CATCGTGCCG
GAATCGCCGC GCTGGCTCGA ACATGCGGGC CGGCACGCGG AAGCCGACAC GGTGATGCAC
GCGATCGAGG CGAAGGTGAT GCGCTCGGCC GGCGTCACGA CGCTGCCGCC GCCGTCGCGG
CTCGCCGAAC CGGCCGCCGC GCGCGGCCGC GGCGCGCTGC GCGAGATCTG GAGCGGCGTG
TACCGCCGCC GCACGGTGAT GGTGTGGCTG CTGTGGTTCT TCGCGCTGCT CGGCTTCTAC
GGCCTCACGT CGTGGCTCGG CGCACTGCTG CAGCAGGCCG GCTTCGAAGT CACGAAATCG
GTGTTCTACA CGGTGCTGAT CTCGCTCGGC GGCGTGCCGG GCTTCCTGTG CGCCGCGTGG
CTCGTCGAAC GCTGGGGCCG CAAGCCGACC TGCATCGCGT CGCTGATCGG CGGCGGCGCG
ATGGCGTACG CGTACGGCCA GAGCGCGCTG TACGGCGGCA GCACGACGCT GCTGATCGTC
ACGGGCCTCG CGATGCAGTT CTTCCTGTTC GGGATGTGGG CGGCGCTGTA CACGTACACG
CCCGAGCTGT ACGGCACCGG GGCGCGTGCG ACGGGTTCGG GCTTCGCGTC GGCGATCGGC
CGGATCGGCT CGCTGATCGG GCCTTACGTG GTCGGCGTCG TGTTGCCGGT GTTCGGCCAG
GGCGGCGTGT TCACGCTCGG CGCGCTGTCG TTCATCGCGG CGGCCGTCGC CGTGTGGACG
CTCGGGATCG AGACGAAGGG CCTCGCGCTG GAACAACTGG CGGCAGGCGA CGATGCGGGC
GGCAGCGGCC GGTATCCGGC GGCGGCAGCG GACGAGGCGT CCTGA
 
Protein sequence
MPAATAPASA AARLERLPFS GYHKRIFFII AIAFFFDSVD LGTMTFVLGS IRKEFGLSTA 
AAGLVASASF FGMVLGAAVA GLLADRFGRR PVFQWSMVLW GAASYLCSTA QSVDALIVYR
VLLGIGMGME FPVAQTLPSE FVPTEKRGRL IALMDGFWPL GFITAGIVAY FVLPQFGWRT
VFALLAIPAV FVLVVRRIVP ESPRWLEHAG RHAEADTVMH AIEAKVMRSA GVTTLPPPSR
LAEPAAARGR GALREIWSGV YRRRTVMVWL LWFFALLGFY GLTSWLGALL QQAGFEVTKS
VFYTVLISLG GVPGFLCAAW LVERWGRKPT CIASLIGGGA MAYAYGQSAL YGGSTTLLIV
TGLAMQFFLF GMWAALYTYT PELYGTGARA TGSGFASAIG RIGSLIGPYV VGVVLPVFGQ
GGVFTLGALS FIAAAVAVWT LGIETKGLAL EQLAAGDDAG GSGRYPAAAA DEAS