Gene Bcen_3247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3247 
Symbol 
ID4096189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp324804 
End bp325523 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content67% 
IMG OID638016546 
Productpyrroloquinoline quinone biosynthesis protein PqqC 
Protein accessionYP_623115 
Protein GI107025604 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C 
TIGRFAM ID[TIGR02111] coenzyme PQQ biosynthesis protein C 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAC CGATCCCCGC TACGGCGTTG CACGCGACGC CCTGGACCGC GACCGAATTC 
GAGGCGCGCC TGCGTGCGCT CGAATCGCGC TATCACATTC ATCATCCGTT CAACCGGCGG
CTCAACAGCG GCGCCTGTTC GCCCACGCAG ATCCGCGGCT GGGTCGCGAA CCGCTTCTAC
TACCAGATCT GCATCCCGCT CAAGGATGCG GCGATCCTGT CGAACTGCCC CGACCGCGAG
ACGCGGCGCC GCTGGATTCA GCGGCTGATC GACCACGACG GGCAGGGCGA CAACGCAGGC
GGCATCGAGG CGTGGGTGCG GCTCGGCGAA GCGTGCGGCC TGACGCGCGA CGAGCTGTGG
TCGCTCGAAC ACGTGCTGCC GGGCGTGCGT TTCGCGGTGG ATGCGTATGT GAACTTCGCG
CGGCGCGCGC CCTGGCAGGA AGCCGTGTGC TCGTCGCTGA CCGAGATGTT CGCGCCGCAG
ATCCATCTCG ACCGGCTCGC GGGCTGGCCG TCGCATTACC CGTGGATCGA ACCGGCCGGG
CTGCATTACT TCCGCAGCCG CGTGCCGCTC GCGCAGCGCG ACGTCGAGCA TGGGCTCGCG
GTGACGCTCG CGCATTTCAC GACACCGGAC GCGCAGCAGC GCGCGCTCGG CATTCTGCAA
TTCAAGCTCG ACATCCTGTG GTCGATGCTC GACGCCGTCG AAAAGGCCTA CCCGTTATGA
 
Protein sequence
MNAPIPATAL HATPWTATEF EARLRALESR YHIHHPFNRR LNSGACSPTQ IRGWVANRFY 
YQICIPLKDA AILSNCPDRE TRRRWIQRLI DHDGQGDNAG GIEAWVRLGE ACGLTRDELW
SLEHVLPGVR FAVDAYVNFA RRAPWQEAVC SSLTEMFAPQ IHLDRLAGWP SHYPWIEPAG
LHYFRSRVPL AQRDVEHGLA VTLAHFTTPD AQQRALGILQ FKLDILWSML DAVEKAYPL