Gene Bcen_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3237 
Symbol 
ID4096179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp308417 
End bp309487 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content67% 
IMG OID638016536 
Productouter membrane protein (porin) 
Protein accessionYP_623105 
Protein GI107025594 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.133992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGCA GGACATGGAC GATGTGCGCG GCGCTGCTCG GCGCGGCCGC CAGCACGAGC 
AGCTTCGCGC AGAGCAGCGT CACGCTGTAC GGCGATCTCG ACGCCGCATT GCTCTATACG
AACCGATCGC TCGATTCGGC CACCGGCGGC AACGCCGGAC GCCAGTTCGC GCTAACGGAC
ACGGGCATGA CGCCGACCAA CTTCGGCATC ACGGGCACCG AGGATCTCGG CGGCGGGCTG
CACGCGAGAT TCAAGCTGGA AAGCGGCTTC AACATCACGG ACGGCGCGTT CGGCCATTCG
AACGGCAACT TCTTCGGCCG CCAGGCGTGG GTCGGGATCG ACGGCGGCTT CGGCGAAACG
AAGGTCGGCC TGCAGTTCTC GCCGTTCGTG CTGGCGATCC TCGGATCGGA CCCGCGCAAC
GTCTCGCACT TCGGCGCCGC GCTGGTGCCG TATGTGGACA ACGTGCTCGT CACCGGCCTC
TTCAACCCGA ACGCGATTTC GTATACGAGC CCGACGATCG CCGGACTGAC GGCCAGCGCG
ATGTTCGGCT TCGGCGGCAA GGCCGGCGAC TTCCAGGCGG GGCGCCAGTA TTCCGGCAGC
CTCACCTATA CGAACGGCGG TTTCATGCTC AACGCGGCGC TCTACGACGG CAACGGCGGC
ACGTCGCCGA CGCCGGTTGC GAGCACGGTC GCGTTCGTCG GCCGCACGAT CGGCGCCGGC
TACACGTTCG GGCCGGTGAC CGGCAAGGCA TCGTTCACGA GCTACAAGGT CGCCGGCTCG
TTCAGCAACA ACGTGTATAG CGCCGGCCTC GACTATCGCG TCACGCCGGC CCTCGACCTG
AACACCGGCG CGTGGTACAC GACCGACCGC AACGATTCGC ACAATCATTC GCTGCTGGCC
GCGATCGGCG CCGACTACAG CCTGTCGAAG CGAACCGGGC TGTATGCGCA GGTCGGCGTG
GTCAACAACC ACGGCGCGAT GAATACCGGC CTCGGCATCA CCGGCGGCGC GCTGTACGGG
TTGCCGGGCA CGACGGTCGG CGTCAATGCC GGCATCCACC ACGTGTTCTG A
 
Protein sequence
MKSRTWTMCA ALLGAAASTS SFAQSSVTLY GDLDAALLYT NRSLDSATGG NAGRQFALTD 
TGMTPTNFGI TGTEDLGGGL HARFKLESGF NITDGAFGHS NGNFFGRQAW VGIDGGFGET
KVGLQFSPFV LAILGSDPRN VSHFGAALVP YVDNVLVTGL FNPNAISYTS PTIAGLTASA
MFGFGGKAGD FQAGRQYSGS LTYTNGGFML NAALYDGNGG TSPTPVASTV AFVGRTIGAG
YTFGPVTGKA SFTSYKVAGS FSNNVYSAGL DYRVTPALDL NTGAWYTTDR NDSHNHSLLA
AIGADYSLSK RTGLYAQVGV VNNHGAMNTG LGITGGALYG LPGTTVGVNA GIHHVF