Gene Bcen_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3226 
Symbol 
ID4095446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp289621 
End bp290544 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content67% 
IMG OID638016525 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_623094 
Protein GI107025583 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.619064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCG CCCTGCCCGC CCGGATCCTG GGCCTCGCGT TCGCCGCCGC CATCGTGGCG 
CCCGGCGCAC ACGCCGACAC GCCCGTCGTG GTGTCGTCGA AGATCGACAC CGAAGGCAAC 
CTGCTCGGCA ACCTCATTTC ACAGGTGCTG AAGGCCCACG GCATTCCCGT CACCGAAAAG 
ATCGCGCTCG GCACGACGCC GATCGTGCGC AAGGCGCTCA CGAGCGGCGA GATCGACGTC 
TACCCCGAAT ACACGGGCAA CGCCGCATTC TTCTTCAACA AGGCCGACGA CCCGGTGTGG 
AAGAACGCGA GCCAGGGCTA CGACACCGCG AAGAAACTCG ACTACGCGGC GAACCATCTC 
GTGTGGCTCG CCCCGGCGCC CGCGAACAAC ACGTGGGGCG TCGCGCTGCT CGCGCCCGTC 
GCGCAGTCGC AGCACCTGAA GACCTTCTCC GATTTCGGCA AGTGGGTGGC CGGCGGCGGC 
AAGGTGAAGC TCGCGGCCTC GGCCGAATTC GTGAACAGCG CGTCCGCGCT GCCGTCGTTC 
GAGAAAGCGT ACGGCTTCAA GCTGAAGCCC GAGCAGCTCG TCGTGCTGTC CGGCGGCGAC 
ACGGCCGCGA CGATCAAGGC CGCCGCGAAC CAGACCGACG GCGTGAACGC CGCGATGGTC 
TACGGCACCG ACGGCGGCAT CGCATCGAGC GGCCTCGCGG TGCTCGACGA CGACAAGCAC 
GTGCAGCCCG TCTACGCGCC GGCGCCGGTG ATTCGCGAAG CCGCGCTGAA AGCGCATCCG 
CAGATCGCCG ACTTGCTCAA GCCCGTGTTC GCGAGCCTCG ACCTTAAGAC GCTGCAATCG 
CTGAACGCCC GCATCCAGCT CAACGGCGAG CCGGCGGCCG GCGTCGCGAA AAGCTACCTG 
AAAGCGAAGG GTTTCGTGAA ATGA
 
Protein sequence
MKLALPARIL GLAFAAAIVA PGAHADTPVV VSSKIDTEGN LLGNLISQVL KAHGIPVTEK 
IALGTTPIVR KALTSGEIDV YPEYTGNAAF FFNKADDPVW KNASQGYDTA KKLDYAANHL 
VWLAPAPANN TWGVALLAPV AQSQHLKTFS DFGKWVAGGG KVKLAASAEF VNSASALPSF 
EKAYGFKLKP EQLVVLSGGD TAATIKAAAN QTDGVNAAMV YGTDGGIASS GLAVLDDDKH 
VQPVYAPAPV IREAALKAHP QIADLLKPVF ASLDLKTLQS LNARIQLNGE PAAGVAKSYL 
KAKGFVK