Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3221 |
Symbol | |
ID | 4095441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 285344 |
End bp | 286030 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638016520 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_623089 |
Protein GI | 107025578 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.434421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACGAC GGTTCTTCTG GCTGATCGTG CTTTCGCTCG GCATTGCGCA GCACGCCGCG GCGCAGCAGG CGCCCGCCTT GCCTGCCTCT GCGCCCGAAG CAGCCGCATC CGCGCCAGGC GATGCATCCG CACCGCTCGC CAACGATCAG CCTAACGAAG CAAACCGCCG CATCACGTCC TACCTGACGA AGAAATTCGG CGTCGCGAAG GAACGCGCCG CGAAGCTCGC CGATATCGTG AGCGTCACTG CGACGAAATA TTCGCTGCCG CCGGCACTCG TTTACGCGAT TATTTCGATC GAATCGCGCT TCCAGGAAAA GGCACGCGGC CAGCATGGCG CGACCGGGTT GATGCAGGTC GTGCCGTCCG CGCACCGCGG CATGCTGCGC AACGTGAAGG ATTTGACGGA GCCGAATGCG AACGTCGAAG TCGGCTCGCG CATTCTGTCG GGCTACGTGA AGGCGGCCGG CGGCAACGTG CAGGCCGGGC TGAAGAGCTA CAGCGGCGGA TCGAGTGCGT ATGCGGCGAA AGTGATGCAG CGGGTCGATT CGTTCCGGTT CGTGCTCGAA CCCGAGGACG ACGCGAAAAG CGCGAATACC GCGAACGACG CGAACAACGC GAAGGCGCAC ATGGTGCCGG TCAGCGATCC GTCACCGGCG CCGGCCGCGA ACCGCAACAC GAAGTAA
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Protein sequence | MRRRFFWLIV LSLGIAQHAA AQQAPALPAS APEAAASAPG DASAPLANDQ PNEANRRITS YLTKKFGVAK ERAAKLADIV SVTATKYSLP PALVYAIISI ESRFQEKARG QHGATGLMQV VPSAHRGMLR NVKDLTEPNA NVEVGSRILS GYVKAAGGNV QAGLKSYSGG SSAYAAKVMQ RVDSFRFVLE PEDDAKSANT ANDANNAKAH MVPVSDPSPA PAANRNTK
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