Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3216 |
Symbol | |
ID | 4095436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 279590 |
End bp | 280855 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638016515 |
Product | sarcosine oxidase beta subunit family protein |
Protein accession | YP_623084 |
Protein GI | 107025573 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0868127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAACGA AGGATCCAAA CATGAGCCGC TACTCGATAT TCAGCCTGTT CCGCAACGGC CTCTCGTATC ACGAGAACTG GGAAAAGCAG TGGAAGAGCC CGGAGCCGAA GAAGGAATAC GACGTCGTGA TCGTCGGCGG CGGCGGCCAC GGCCTCGCGA CCGCGTACTA CCTCGCGAAG GAGCACGGGA TCACGAACGT CGCGATCCTC GAGAAGGGCT GGATCGGCGG CGGCAACACC GCGCGCAACA CGACGATCGT GCGCTCGAAC TACCTGTGGG ACGAATCGGC CGCGCTGTAC GAGAAGGCGA TGAAGCTGTG GGAAGGGCTG TCGCAGGATC TGAACTACAA CGTGATGTTC AGCCAGCGCG GCGTGATGAA CCTCGCGCAC ACGCTGCAGG ACGTGCGTGA CACCGAGCGT CGCGTGAACG CGAACCGCCT GAACGGTGTC GACGCCGAAT TCCTGACGCC CGCGCAGATC AAGGAAATCG AGCCGACGAT CAACCTGAAC AGCCGCTACC CGGTGCTCGG CGCATCGATC CAGCGCCGTG CGGGCGTCGC GCGCCACGAC GCGGTGGCCT GGGGCTTCGC ACGCGGCGCG GATCGCGCCG GCGTCGACAT CATCCAGAAC TGCCAGGTGA CGGGCATTCG CCGCGAAGGC GGCGCGGTGG TCGGCGTCGA TACGGTGAAG GGTTTCATCA AGGCGAAGAA GGTCGCGGTG GTGGCCGCCG GCAACACGAC CACGCTCGCC GACATGGCCG GCGTGCGTCT GCCGATCGAA AGCCATCCGC TGCAGGCGCT GGTGTCCGAG CCGATCAAGC CGGTCGTCAA CTCGGTGATC ATGTCGAACG CGGTGCACGC GTACATCAGC CAGTCCGACA AGGGCGACCT CGTGATCGGC GCCGGTATCG ACCAGTACAC GGGCTTTGGC CAGCGCGGCA GCTTCCACAT CATCGAAAGC ACGCTGCAGG CGATCGTCGA GATGTTCCCG GTGTTCTCGC GCGTGCGGAT GAACCGCCAG TGGGGCGGCA TCGTCGATGT GTCGCCGGAC GCGTGCCCGA TCATCACCAA GACCGACGTG AAGGGCCTGT ATTTCAACTG CGGCTGGGGC ACCGGTGGCT TCAAGGCGAC GCCAGGCTCG GGCTGGGTGT TCGCGCACAC GATCGCACGC GACGAACCGC ATCCGCTGAA CGCACCGTTC GCACTCGACC GCTTCTACAC GGGCCACCTG ATCGACGAGC ACGGCGCCGC CGCCGTCGCG CACTAA
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Protein sequence | MLTKDPNMSR YSIFSLFRNG LSYHENWEKQ WKSPEPKKEY DVVIVGGGGH GLATAYYLAK EHGITNVAIL EKGWIGGGNT ARNTTIVRSN YLWDESAALY EKAMKLWEGL SQDLNYNVMF SQRGVMNLAH TLQDVRDTER RVNANRLNGV DAEFLTPAQI KEIEPTINLN SRYPVLGASI QRRAGVARHD AVAWGFARGA DRAGVDIIQN CQVTGIRREG GAVVGVDTVK GFIKAKKVAV VAAGNTTTLA DMAGVRLPIE SHPLQALVSE PIKPVVNSVI MSNAVHAYIS QSDKGDLVIG AGIDQYTGFG QRGSFHIIES TLQAIVEMFP VFSRVRMNRQ WGGIVDVSPD ACPIITKTDV KGLYFNCGWG TGGFKATPGS GWVFAHTIAR DEPHPLNAPF ALDRFYTGHL IDEHGAAAVA H
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