| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3209 |
|---|
| Symbol | |
|---|
| ID | 4095982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 271594 |
|---|
| End bp | 272919 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638016508 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_623077 |
|---|
| Protein GI | 107025566 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCTC TCGACGCGGC CGCAAGCCGC TCGCCCGCCG CGGCCGCCCA ATCGGGCGAA
CTCGACCGCA CCTACAAGAA AGTGTTCTGG CGCATCGCGC CGTTCCTGAT GCTCTGCTAC
GTGGTCGCAT ATCTCGACCG CGTGAACGTC GGCTTCGCCA AGCTGCAGAT GTCGCAGGAT
CTCGCGTTCA GCGAAACCGT GTTCGGACTC GGCGCCGGCA TCTTCTTCCT TGGCTACTTT
CTGTTCGAAC TGCCAAGCAA CCTGCTGATG CACCGCCTCG GCGCGCGCAT CTGGATCGCG
CGGATCATGA TCACGTGGGG CCTGCTGTCC GCGCTGTTCG CCTTCGTGCA GACGCCGACG
CAGTTCTACG TGCTGCGCTT TCTGCTCGGG CTCGCGGAAG CCGGCTTCTA TCCGGGCGTG
ATCCTGTACC TCACGTACTG GTTCCCGTCG CATCGCCGCG CGAAGATCAT CGCGGTGTTC
ATGTCCGCGA TTCCGGTGTC GGGCATCTTC GGCAACCCGC TGTCGGGCTG GATCATGGAG
CGCTTCCACG GCGGCTCGGG CTTTCACGGC TGGCAATGGA TGTTCATGAT CGAGGCCGTG
CCGGCCGTGC TCATCGGCAT TGCGACGATC CTGTATCTCG ACAACAGCAT CCGCGGCGCG
AAGTGGCTCG ACGAGCGCGA GAAGCAGCTG CTCGAGGACG AAATCGCCGC GCAGCCGCAG
GAACAGCAGC AGCACGGCCA TTCGCTGAAG GCCGTGTTCT CGGACCCGCG CATGTGGTGG
ATGTCGCTGA TCTACTTCGC GTTCGTCACC GGCCAGTACG GGCTCACGTT CTGGATGCCG
ACGCTCGTCA AATCGACCGG CATTACCGAT ACGCTGCAGA TCGGCCTGCT GTCGGCGATT
CCGTTCGTCG TCGCGATCGT CGTGATGAAC CTGTTCGGCC ACAGCGCGGA CAAGCGGCGC
GAACGCCGCT GGCACCTGAT CGTGCCGGCG CTGATGGGCG CGATCGGATT TGCGGTCGCC
GCGTCGTACT CGCACAATAC GGCGGTGTCG ATCGTGTTCC TGTCGCTCGC GGCAGGCGGC
GTGCTGACCT GCGCGCCGCT GTTCTGGTCG CTGCCGACCG CGTTCCTCGC GGGCTCCGCG
GCCGCGGCCG GGATCGCGAT CATCAACTCG GTCGGCAACC TCGCCGGTTT CGCGAGCCCG
TACGTGATCG GCTACCTGAA GGACGCCACG CACAGCACCG CGTCCGGCAT GTACGTGCTC
GCCGCAATGC TCGTGATCGG CGCGATCGCC GTGTGGCTCA CGCCCGCCAA ACTCGTGAAC
CGCTGA
|
|---|
| Protein sequence | MTALDAAASR SPAAAAQSGE LDRTYKKVFW RIAPFLMLCY VVAYLDRVNV GFAKLQMSQD
LAFSETVFGL GAGIFFLGYF LFELPSNLLM HRLGARIWIA RIMITWGLLS ALFAFVQTPT
QFYVLRFLLG LAEAGFYPGV ILYLTYWFPS HRRAKIIAVF MSAIPVSGIF GNPLSGWIME
RFHGGSGFHG WQWMFMIEAV PAVLIGIATI LYLDNSIRGA KWLDEREKQL LEDEIAAQPQ
EQQQHGHSLK AVFSDPRMWW MSLIYFAFVT GQYGLTFWMP TLVKSTGITD TLQIGLLSAI
PFVVAIVVMN LFGHSADKRR ERRWHLIVPA LMGAIGFAVA ASYSHNTAVS IVFLSLAAGG
VLTCAPLFWS LPTAFLAGSA AAAGIAIINS VGNLAGFASP YVIGYLKDAT HSTASGMYVL
AAMLVIGAIA VWLTPAKLVN R
|
|---|
| |