Gene Bcen_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3198 
Symbol 
ID4095971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp262884 
End bp263780 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content64% 
IMG OID638016497 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_623066 
Protein GI107025555 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID[TIGR03414] choline ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGCCG TTTATGCGGC CGATCCGCCC GTGTGCAAGA ACGTGCGCTT CGCGGATGTC 
GGCTGGTCCG ACATCGCGGC GACCACGGGC CTCGCGTCGA CGATGCTGCA GGGGCTCGGC
TACAACCCGA CGAAGACGAT CGCCTCGGTG CCGATCACGT TCGCGGGGAT CAAGAGCAAG
CAGATCGATG TGTTCCTCGG CTACTGGTCG CCGACGATGG ACCCGATCAT CCAGCCGTTC
ACGAAGGCCG GCACGATCAA GGTGCTCGCG ACGCCGAACC TGACCGGCGC GAAATACACG
CTCGCGGTGC CCGACTACGT GTACCAGGGC GGCCTGAAGT CGTTCGCGGA CATCCAGAAG
TACGCGGACA AGCTGAACGG CAAGATCTAC GGGATCGAGC CGGGCAACGA CGGCAATGCG
CTGATCAAGA AGATGATCGA CGGCAACCAG TTCGGCCTCG GCAAGTTCAA GCTGGTCGAG
TCGAGCGAGG CCGGGATGCT GGTCGAAGTG AATCGCGCGG CCCGCGACAA GCAGTGGATC
GTGTTCCTTG GGTGGGAACC GCATCCGATG AACGTGCAGA TGAAGATCGA CTACCTGACC
GGCGGCGACG ATGTGTTCGG CCCGAACTAC GGCGAAGCGA AGGTGCTGAC CGCAACCCCG
CCCGATTACG CGCAACGCTG CCCGAACGTC GCGAAGTTCG TGTCGAACCT GCAGTTCACG
ACGTCGATCG AGAACCACGT GATGGTGCCG ATCATGAACA AGCAGGACCC GAACAAGGCC
GCCGCCGACT GGCTGAAGGC GAACCCGCAA GCGCTCGACA AGTGGCTGGC CGGCGTGACG
ACGCTCGACG GCAAGCCCGG CCTGCCGGCG GTGAAGGCGT ACCTCGGCGT GCATTGA
 
Protein sequence
MSAVYAADPP VCKNVRFADV GWSDIAATTG LASTMLQGLG YNPTKTIASV PITFAGIKSK 
QIDVFLGYWS PTMDPIIQPF TKAGTIKVLA TPNLTGAKYT LAVPDYVYQG GLKSFADIQK
YADKLNGKIY GIEPGNDGNA LIKKMIDGNQ FGLGKFKLVE SSEAGMLVEV NRAARDKQWI
VFLGWEPHPM NVQMKIDYLT GGDDVFGPNY GEAKVLTATP PDYAQRCPNV AKFVSNLQFT
TSIENHVMVP IMNKQDPNKA AADWLKANPQ ALDKWLAGVT TLDGKPGLPA VKAYLGVH