| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3197 |
|---|
| Symbol | |
|---|
| ID | 4095970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 261661 |
|---|
| End bp | 262728 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638016496 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_623065 |
|---|
| Protein GI | 107025554 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAACG ACTTCCGCGG CTTCGGCCGC GGAGTTGGCC CCCTGCAACC TCCTCGCCAG
GAGACCGATG TGACGTCCGC CGTCGCTGTC GCGCCCGCCG CCTGCGTTTC ACCGGTTTCG
TCCCTCGCCC ATTTCGGCTT CCTGACGCTG CCGAACTTCT CGATGATCGC GTTCTCGAGC
GCGGTCGAAG TGCTTCGGAT GGCGAATTAC GTCGGGCGGG CGGATCACTA CAAGTGGTCG
ATCTACTCGC TCGACGGCGC GCCCGCGCAT GCCAGCAACG GCATCGCCGT GCGGCCCACG
CAGGCGCTCG ACTACGACAA CCTGCCCGAC GTGATGATCG TGTGCGGCGG CATCCGCATC
CGCGACGTGG TCGACGAGGG CGCGCGCGAT ACGCTCGCGG CGCTCGCCGA ACGCGGTCTG
CCGCTCGGCG GCATCTGCAC GGGTGCCTAT GCGCTGATGT CGAGCGGGCT GCTCGACGGC
TATCGCTGCA CCGTGCACTG GGAGAACCTG TCCGCGCTGC ATTCCGAATT TCCGCGAGTG
GGCTTCGCCG ACGAGCTGTT CGTCGTCGAT CGCGACCGGC TGACCTGCAC GGGCGGCACC
GCGCCGCTCG ACCTGATGCT GAACCTCGTC GGCATGCGGT TCGGCCAGCA ACTGGCCGCG
CAGGTATCCG AGCAGTTCAT CCTGGAGCGC ATTCGCAGCT CGACCGATAC GCAGCCGATT
CCGGTCGATG CGCGGGTCGG CTTCTCGCGC GCGGAGCTGA TCGAGGTCGT ACGGCTGATG
GAGGCGAACA TCGAGGAGCC GCTGTCGCTC GAGGAGCTCG CGCGGCTCGT GCGGCTGTCG
CAGCGGCATC TGCAGCGCAT GTTCAAGGTG TACCTGAACG TATCGCCGAC CCACTATTAC
CTGACGCTGC GCCTGAAACG CGCCCGCGAC CTGCTGCGCA CGACCGATGC ATCGATCGCA
CGCGTGACGA CGGTCTGCGG CTTTCATTCG CCGTGTCATT TCAGCAAGGC ATACCGCGCG
CAGTTCGGCC ACGCGCCGAG CTACGAGCGG CGGCTGCCCG GGCGCTGA
|
|---|
| Protein sequence | MDNDFRGFGR GVGPLQPPRQ ETDVTSAVAV APAACVSPVS SLAHFGFLTL PNFSMIAFSS
AVEVLRMANY VGRADHYKWS IYSLDGAPAH ASNGIAVRPT QALDYDNLPD VMIVCGGIRI
RDVVDEGARD TLAALAERGL PLGGICTGAY ALMSSGLLDG YRCTVHWENL SALHSEFPRV
GFADELFVVD RDRLTCTGGT APLDLMLNLV GMRFGQQLAA QVSEQFILER IRSSTDTQPI
PVDARVGFSR AELIEVVRLM EANIEEPLSL EELARLVRLS QRHLQRMFKV YLNVSPTHYY
LTLRLKRARD LLRTTDASIA RVTTVCGFHS PCHFSKAYRA QFGHAPSYER RLPGR
|
|---|
| |