| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3172 |
|---|
| Symbol | |
|---|
| ID | 4095373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 230592 |
|---|
| End bp | 232280 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 638016472 |
|---|
| Product | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_623041 |
|---|
| Protein GI | 107025530 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0492] Thioredoxin reductase
[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGTGC GTTCAAATGA TGATGGTAAG CAAGGCGATA CCAACCCACT GTCCAGCCCG
GTTGCGATTG GTGACACCGA TTACCAACGG GAGCGATACC CATTACTCAC CGAAGCGGAA
ATACACCGAA TCACGCGATT CGGTGAAATC CGCGAGTGGA ACGACGGCGA TCAGATCTTC
CGTGTGGGCG AGCCGGGCTT CGGTATGTTC GTCATCCTTT CGGGCTCGAT TCGCGTCACT
CGCCGGGATG CACTGAACCG ACAGATTATT GTCAAAGAGC TGGGGGATCA TCATTTCGTC
GCCGAGGTTG GCCAGATATC AGGAGCGAGA TGCCTAGTTG ACGGCGATGC CGCAGGCAAC
GTCCGCGCAC TTCAAGTTAC ACCGGCCAGG CTGCGGGCAC TGATGATCGC AGAAGCAGAA
CTCGGCGAGC GCATCATGAG AGCCTTGATC CTGCGGCGAG CTGGACTCGT CGAAGGCGGC
AGCGGCATCA TCGTCGTCAC GGAATCAAAT TCGCCGATTC TCAATGCACT TCAGAACTTT
CTCACACGGA ACAGCATTCC CTACACCGTC GTCGATAGTT CGGATCTGGA GATTGCGCGC
TACGTCAATC AATACCCCAC CGATTCCGCA GACTATCCGC TCGTTATCTG CCCGGACGGA
AAGGTTCTCT GCGCGCCAAC CGAAACCGAA CTGGCGACAG CGCTCGACCT CATTCCCGAT
TTTGATGAAG CCGAAGTGTT CGATGTCGCG ATCGTCGGCT CGGGCCCTGC CGGCCTGGCC
ACTGCGGTGT ATGCAGCATC GGAAGGCCTA GCTGCCGTCA TTTTGGATAA CCACGCACCA
GGAGGACAGG CAGGCGCGAG CGCGCGCATC GAGAATTTCT TCGGTTTCCC GGCTGGTATA
TCAGGGTATG CACTGACCGC ACGCGCATAT ATCCAGGCTC AGAAATTCGG TGCGCGCGTC
GCGATCCCGG TGGATGTCGA AGCCCTGGAA TGTGACACGT CTCCATTTCG CCTCCGGCTC
GGTAATAACG GCACGGTGCG GGCCCATTCG GTCGTCATAG CTACAGGCGC GGCTTACCGC
AAGCCTGCGA TCGAAGGGAT CGAACGTTTT CAGGGGCGAG GCGTGTATTA CTGGGCCTCT
CCGGTAGAAG CCAAACTATG CGCGGGGAAA AATGTCGTGC TTGTCGGCGC CGGAAACTCG
GCCGGACAGG CCGCCGTCTA TCTGGCATCG CATGCGAAAC ATGTCAGCAT GCTTGTTCGG
GGACCGAATC TATCCGACAG CATGTCGCGC TATCTCATCG ATCGCATCGA ATCGATGGAC
AACATCGACA TTCACTTCAA TACGCAGATT GCGTCGTTTC GCGGTGAGGA TGAGCTGGAG
GAAATCGAGA TTGCCGGCTC CGACGGAAAG CGCACATCGA AGAAAGCGGA GCACGTCTTC
CTGTTTATCG GGGCGATACC TAACACCTCG TGGCTTGACG GATGTGGGGT CACCGTCGAC
ACATCCGGCT TTGTGCTAAC GGGATCCGAC GTTTCCGCAC AGGCTGGAGA GCATGAAACC
AGTGTCCGTG GCGTATTTTG TGCCGGAGAC GTGCGGCATG ATTCCACCAA GCGCGTGGCG
GCCGCTGTCG GCGACGGAGC AGCGGTCGTC TCGCAGCTTC ACAAGTTTCT TGCCAGCTTG
ACCGCATAA
|
|---|
| Protein sequence | MHVRSNDDGK QGDTNPLSSP VAIGDTDYQR ERYPLLTEAE IHRITRFGEI REWNDGDQIF
RVGEPGFGMF VILSGSIRVT RRDALNRQII VKELGDHHFV AEVGQISGAR CLVDGDAAGN
VRALQVTPAR LRALMIAEAE LGERIMRALI LRRAGLVEGG SGIIVVTESN SPILNALQNF
LTRNSIPYTV VDSSDLEIAR YVNQYPTDSA DYPLVICPDG KVLCAPTETE LATALDLIPD
FDEAEVFDVA IVGSGPAGLA TAVYAASEGL AAVILDNHAP GGQAGASARI ENFFGFPAGI
SGYALTARAY IQAQKFGARV AIPVDVEALE CDTSPFRLRL GNNGTVRAHS VVIATGAAYR
KPAIEGIERF QGRGVYYWAS PVEAKLCAGK NVVLVGAGNS AGQAAVYLAS HAKHVSMLVR
GPNLSDSMSR YLIDRIESMD NIDIHFNTQI ASFRGEDELE EIEIAGSDGK RTSKKAEHVF
LFIGAIPNTS WLDGCGVTVD TSGFVLTGSD VSAQAGEHET SVRGVFCAGD VRHDSTKRVA
AAVGDGAAVV SQLHKFLASL TA
|
|---|
| |