Gene Bcen_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3171 
Symbol 
ID4095372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp229174 
End bp230268 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content58% 
IMG OID638016471 
ProductLysR family transcriptional regulator 
Protein accessionYP_623040 
Protein GI107025529 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCA CACTGCAGGC GATGTCGATT TTCACGTACA TCGTGCGTGT GGGAAGCTTC 
ACGGCAGCGG CAAAACTGCT TGGCATCAGC GCCGGAACGG CCAGTCGCCT GGTACGCAAT
CTCGAGAATC ATCTCGGCGT GACCTTGTTG CAGCGCTCCA CGCGATGCGT GCGCTTGACT
ACCGAGGGCG CGCAGTATTT TGAGCACTGC GAGCGGGTGC TGGGCGAGAT CGAAGAAGTG
AAGGCTCATC TCGCCGGCGC GCGGGATGTG GCGCGTGGCC GCTTGTCGGT GGACATCGAT
CAGGAGATCG CTCATACGGT GTTGCCGCTG ATCCCGGAAT TTCGCCTGAC ATTTCCGGAA
GTGGAACTTC GCCTAGAAAT CGGTGGCGAT CCAGGCGGCC TGGTCGAGCA CGGAATCGAT
TGTGCGATCG CGGTAGGGCC GCTGCCGGAT TCGTCACTCC GCGGGCGACG CATTGGCGAC
TTCAACGCAG TGACGGTCGC GAGCCCGGCC TATCTGTCCC GACGCGGCGT TCCGCATGAG
CTTGGCGATT TGGATCGCCA CGACATCATT CATTATTCCC CCCGCCGTTT CGGCCCCGTG
CGTGACTTCA GATATTGCGT GGACGGAGGC GAGGTGAGCT TGAAATTTCC CGAGCGGATC
TCTGTTAGTG ATGCGCGTTC GGCAGTTCAG TACGCTGTTG AAGGTATCGG AATCGCACAG
GTGTGCGGCC GAATGGTAGT GAACGAAATA GCCAATGGAC GTTTGGTGAG CCTCTTAGCC
GAAAATCGTC CGACATCGCT GCAGATCTTT GCCCTTTATG TGGACCAGCG CTACATTCCG
AGGTCGATTC GTGCTTTCAT CGACTGGCTC GAGATTCAGC TGCGTTGGAG GAATGCGAAT
GTGATTGCTC CATCAATGAT GGAGATTGGA AAATCGCGCG CATTGCCGTC GTGTTGGGGC
ACGGACGCTT CGCGCGGCAA CACGCAGTTT GCAGCGGAGT CTGAAGGGGC ACAGCACCTC
GTTTTCGGAC GTGCGAAATC CGACGTGCAC GTTGAACTGG ATCTGACCGC TCTCCATGCG
ATGCTTGAAA TCTGA
 
Protein sequence
MEITLQAMSI FTYIVRVGSF TAAAKLLGIS AGTASRLVRN LENHLGVTLL QRSTRCVRLT 
TEGAQYFEHC ERVLGEIEEV KAHLAGARDV ARGRLSVDID QEIAHTVLPL IPEFRLTFPE
VELRLEIGGD PGGLVEHGID CAIAVGPLPD SSLRGRRIGD FNAVTVASPA YLSRRGVPHE
LGDLDRHDII HYSPRRFGPV RDFRYCVDGG EVSLKFPERI SVSDARSAVQ YAVEGIGIAQ
VCGRMVVNEI ANGRLVSLLA ENRPTSLQIF ALYVDQRYIP RSIRAFIDWL EIQLRWRNAN
VIAPSMMEIG KSRALPSCWG TDASRGNTQF AAESEGAQHL VFGRAKSDVH VELDLTALHA
MLEI