| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3121 |
|---|
| Symbol | |
|---|
| ID | 4095776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 161421 |
|---|
| End bp | 163589 |
|---|
| Gene Length | 2169 bp |
|---|
| Protein Length | 722 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638016421 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_622990 |
|---|
| Protein GI | 107025479 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCCC GTCGAACGCC CTGCCGCGCC CGGACCTTGC ATCCGTGGCG CATGCCCCTG
CCTGCCCTGC TCACCCTGTG CGTCGCGAGC GGCGCGCATG CGGCCGGCGC CGAACCCGTT
GCGCCCGCGC CCGCCGCCGC GCCGGCCGCC GAACACGAAC TCCCGGCGAT CAGCATCAAC
GCCTCGGCCG CCGTCGATCC GACGATCGGC TATCAGCCGC GCACGACGAA CATCGCGGGC
GGCGACGCCC GGGCGCTGAA GGAGATCCCG CAATCGGTCG CGGTGGTCAG CAGCAGCGTG
ATGCAGGACC AGCAGGCGCG CTCGCTCGAC GACGTGCTCG GCAACATCAG CGGCGTCACG
CAGACCAACA CGCTCGGCGG CACGCGCGAC GCGTTCATCA AGCGCGGCTT CGGATCGAAC
AACGACGGCT CGGTGCTGGT CGACGGCGTG CGCACGCCGG TGCTGCACAG CTATCTCGCG
ACGATCGATC GCGTCGAAGT ACTGAAGGGC CCCGCTTCGC TGCTGTACGG GATGCAGGAC
CCGGGCGGCG TGATCAACCT CGTCACGCGC AAGCCGGAAG ACACGTTCGG CGGCTCGATC
TCCGCGTCGC GCACGAACCA CGGCGGCAGC AACGCACAGT TCGATCTCAC GGGGCCGCTC
GGCAAGCCCG GCCAGGTCGC GGGCGGCACG CTCGCCTTCC GGCTGACCGG CGAATACGAC
ACGAGCCGCT ACTGGCGCAG CTTCGGCCGC GAACGCAACG CGCTGATCGC GCCCGCGCTG
TCGTGGCACG ACGCGAACAC GTCGATCGAC GTCAGCTACC AGTACGTCGA CTACACGATG
CCGTTCGACC GCGGCACCGT GCTCGTGAAC GGCCAGCTCG ACGAGGCACT GCGCTATCGC
CGCTACGAGG AAGCGTGGTC GCAAAGCAGC GGCATCCAGG AAACGCTGCG CACGCGCATC
GAGCACCGCT TCTCCGATGC TTGGCGCGTG CGCGCGACTT ACGGTTGGGG CCGCGACCGC
TACGATCAGT TCATCACCCG CGCCACCGCG TTCAACAGCA GAACCGGCGC GCTGACGCGC
TCGTCCGACG CGAACCTCGG GCGCAACGAT TCCGACCAGA TCGCGACGCT CGGGCTGCTC
GGCAACGTGA CGCTCGCGGG CATGCAGCAC GCGATCTACG TCGGCGGCGA ATACGAGCGG
CAGCGCAGCT TCCGCGGCGA CACGATCCGC GGCAAGGCGA CGACGGGCTT CAATCTCTAC
GATCCCGTGT ATGGCCTGCT CGCGCCGGGC GGCATGGCCA ACGCGAAGCA GAGCGATTCG
CGCTCGGTCG TGCATGCGTA TTCGACGATC GTGCAGGACT CGGTGAAGAT CACCGACCGC
CTCACCGCGG TAGGCGGGCT GCGCTGGGAA AACTGGCAGC AGGAATCGGG AATGGGCCGG
CCGTTCGTGT TCGCCGACCG CTCGCGCGGC AGCGTCTGGC TGCCGCAGTT CGGGCTCGCG
TATGCGCTCA CGCCGGCGCT CACCGCCTAT GCGAACGTGA GCCGCTCGTT CAAGCCGAAC
GTCGCGTCGA ACGTCGCGGC GCCGCTCGCG CCGGAATATG GCCGCGTGCT CGAGGCCGGG
CTGAAGTTCA GCCTGAAGCC CGCGATCACG GGCACGCTCG CCGTGTACCA GATCGACAAG
CGCAACGTCG CGGTCACGGT CGGCGACCTC ACGTCGACGA TCGGCACCGC GCGCTCGCGC
GGGATCGAGC TCGACGTGGC CGGGCAGATC ACGCGCCACC TGAGCGTGAT CGGCAGCTAT
GCGTATACGA ACGCGAACGA TCGTGACAGC AACACGCCGC TCGTCAACGT CGCGCGCCAC
ACGGGCAGCC TGTTCGCGGT ATACGACACG GCCATCGCGA ACCTGCCCGG GCGCTGGCGC
TTCGGCGGCG GCGCGCGTCT CGTCGGCGCC CGCTCCGGCG ACACCGCGAA CAGCTTCACG
CTGCCCGGCT ACGTGAGCGT CGACGCGTTC GCGGCGTACG AAACGACGAT CGGCAAGTTT
CCGACCCGCT TCCAGCTCAA CGTGAAGAAC CTGCTCGACA AGACCTACTA TCCGTCGAGC
AACAGCAACC TGATCGTCGC GGTCGGCGAG CCGCGGCTCG TCACGCTGAC GACCACGGTA
TCGTTCTGA
|
|---|
| Protein sequence | MPSRRTPCRA RTLHPWRMPL PALLTLCVAS GAHAAGAEPV APAPAAAPAA EHELPAISIN
ASAAVDPTIG YQPRTTNIAG GDARALKEIP QSVAVVSSSV MQDQQARSLD DVLGNISGVT
QTNTLGGTRD AFIKRGFGSN NDGSVLVDGV RTPVLHSYLA TIDRVEVLKG PASLLYGMQD
PGGVINLVTR KPEDTFGGSI SASRTNHGGS NAQFDLTGPL GKPGQVAGGT LAFRLTGEYD
TSRYWRSFGR ERNALIAPAL SWHDANTSID VSYQYVDYTM PFDRGTVLVN GQLDEALRYR
RYEEAWSQSS GIQETLRTRI EHRFSDAWRV RATYGWGRDR YDQFITRATA FNSRTGALTR
SSDANLGRND SDQIATLGLL GNVTLAGMQH AIYVGGEYER QRSFRGDTIR GKATTGFNLY
DPVYGLLAPG GMANAKQSDS RSVVHAYSTI VQDSVKITDR LTAVGGLRWE NWQQESGMGR
PFVFADRSRG SVWLPQFGLA YALTPALTAY ANVSRSFKPN VASNVAAPLA PEYGRVLEAG
LKFSLKPAIT GTLAVYQIDK RNVAVTVGDL TSTIGTARSR GIELDVAGQI TRHLSVIGSY
AYTNANDRDS NTPLVNVARH TGSLFAVYDT AIANLPGRWR FGGGARLVGA RSGDTANSFT
LPGYVSVDAF AAYETTIGKF PTRFQLNVKN LLDKTYYPSS NSNLIVAVGE PRLVTLTTTV
SF
|
|---|
| |