Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3119 |
Symbol | |
ID | 4095774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 157592 |
End bp | 158857 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638016419 |
Product | porin |
Protein accession | YP_622988 |
Protein GI | 107025477 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAAGAAG CTGCCTGTCA ACAGCATTCC TTTCCTTCCC GCCATCAATG GCGGGGTTTC TCGGAGCAAC TGATGAACAA GCAACTGATC GCAGCGCCGC TGCTGCTCTC GCTCGCGAGT GTCGCCGCCG CGCAAAGCTC CGTCACGCTG TACGGCATCG TCGATGCGGG CGTGACCTAT CGCAGCAACG AACGGGTCGG CTCGGCGGGC GCGTACACCG GGCATTCGAG CGTCGGGCTC ACGACCGGCA ACCTGTCCGG CAGCCGGTGG GGCATCAAGG GTTCCGAGGA TCTCGGCGGC GGGATGCGCG CGCTGTTCGT TCTCGAGAAC GGCTTCGACA TCACCAACGG CACGTCCGGC CAGGGCGGCC GCCAGTTCGG CCGGCAGGCG TTCGTCGGCG TCGGCAGCGA CCGCTACGGC ACGGTCACGC TCGGCCGCCA GTACACGTCG CTCGACGATT TCGTGAGCCC GGTCGGCCCG TCGTCGTTCA TCGGCGGCTT CGGCGCGCAC CCGGGCGACA TCGACGATCT CGACCAGACC GCGCGCGTCG ACAGCTCGAT CAAGTACACG AGCGCGAACT ACTCGGGCTT CACGTTCGGC GCGCTGTACG GCTTCGGCGG CCAGCCGGGC AGCATGAAGC AGCGCAACAC GTGGAGCGTC GGCGCCGCAT ACGCGGCCGG CCCGCTGCGT GTGGGCGTCG GCTACGAGCG CTCGGACAAC AGCAAGAAGG GCGCGACCGA CCCGACGGCG GGCAAGTGGC AGAGCACCGA CGACGGGCTG TTCAATTCGT CGATCAACGA AGGCTATGCG AGCGCGCAGT CGCAGCAGGT GATCGCGACC GGCGCGACGT ACGACTTCGG CCCGGCCGTC GTCGGCGTGA ACTACAGCAA CGTGCAGTAC CGCGGCGGCG CGCAGTCGTT GTTCAGCGGC CATGCGACGT TCAACGTCGC GGGCGTGTTC ACGCGCTGGA ACGTGCAGCC GCAGACGCAG CTGTTCGCGG GCTACAGCTA CACGCGCGGC AGCGACGTCG ACGGTATCGA CAACCGCGCG CAGTATCACA ACGTCACGCT CGGCGCGGTC TACGACCTGT CGAAGCGCAC CAGCGTGTAC CTGCTCGGCG CGTACCAGCA TGCGTCCGGC ACGACGCTCG ACGCGCTCGG CCGGCCGGTG GCCGCGACTG CGTCGGTGTC CGACAAGGCG AACGGCCATT CGTCCGATTC GCGGTCGCAG GCGATCGTGA GCCTCGGGCT GCGCCAGAAG TTCTGA
|
Protein sequence | MEEAACQQHS FPSRHQWRGF SEQLMNKQLI AAPLLLSLAS VAAAQSSVTL YGIVDAGVTY RSNERVGSAG AYTGHSSVGL TTGNLSGSRW GIKGSEDLGG GMRALFVLEN GFDITNGTSG QGGRQFGRQA FVGVGSDRYG TVTLGRQYTS LDDFVSPVGP SSFIGGFGAH PGDIDDLDQT ARVDSSIKYT SANYSGFTFG ALYGFGGQPG SMKQRNTWSV GAAYAAGPLR VGVGYERSDN SKKGATDPTA GKWQSTDDGL FNSSINEGYA SAQSQQVIAT GATYDFGPAV VGVNYSNVQY RGGAQSLFSG HATFNVAGVF TRWNVQPQTQ LFAGYSYTRG SDVDGIDNRA QYHNVTLGAV YDLSKRTSVY LLGAYQHASG TTLDALGRPV AATASVSDKA NGHSSDSRSQ AIVSLGLRQK F
|
| |