Gene Bcen_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3117 
Symbol 
ID4095772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp155571 
End bp156203 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content70% 
IMG OID638016417 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_622986 
Protein GI107025475 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGAAA CGACCCTGCT GATCTTCGCC GCCGTCGCGT TCGTCGGCAT CGCGACACCT 
GGCCCGACCG TGCTGCTCGC GCTGACCAAC GGCTCGCGCT ACGGCGTGCG CCGCGCGGCG 
TTCGGTTTCG CGGGCGCGAT GCTGTCCGAC TTCGTGCTGA TCGTCGCGGT CGCGCTCGGC 
CTCGGCGCGC TGCTGATGGC GTCGGCGTTC TGGTTCTCGG TCGTGAAGTG GCTCGGCGCC 
GCGTACCTCG CGTATGTCGG CATCCGGCTG CTGACGTCGA AAGGGGCGCT CGACGTCGTG 
GTCGCGCAGC GCGGCACGGC CTCCGGACGC AACGCATCGA TCTTCGCGAA AAGCTTCCTG 
ACCGCGGTGA CGAACCCGAA GGGCTATCTG TTCTTCTCCG CGTTCCTGCC GCAGTTCCTC 
GATCCGCTGG CGCCGCTCGC GCCGCAGTAC GTCGTGCTCG CGGTCACGTT CGCGCTGCTC 
GACGGCGCGG TGATGTTCGG CTACGCGCTG CTCGGCGCAC GCGCGGTGCG GCTGCTGAAG 
CGCTCGGGCG CGCTGTGGCT CGAACGCACG TGCGGCGCGA TGCTGCTCGC GCTCGCCGGT 
TCGCTGGCGC TGTACCGGCG CCATGCCGCG TAG
 
Protein sequence
MHETTLLIFA AVAFVGIATP GPTVLLALTN GSRYGVRRAA FGFAGAMLSD FVLIVAVALG 
LGALLMASAF WFSVVKWLGA AYLAYVGIRL LTSKGALDVV VAQRGTASGR NASIFAKSFL 
TAVTNPKGYL FFSAFLPQFL DPLAPLAPQY VVLAVTFALL DGAVMFGYAL LGARAVRLLK 
RSGALWLERT CGAMLLALAG SLALYRRHAA