Gene Bcen_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3109 
Symbol 
ID4095881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp148226 
End bp149734 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content73% 
IMG OID638016409 
ProductGntR family transcriptional regulator 
Protein accessionYP_622978 
Protein GI107025467 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAA CGGCCCGGAT CGTCGAAATC CCGTCGCTCG GCGTGCTCGA CCGCGCGGCC 
GGCGACCTGA GCCGCCAGCT CGCGCAGGCG CTGCGCGACG CGGTGCGCCG CGGCGACGTC
CGGCCCGGCG ATACGCTGCC TTCCACGCGG CTGCTGGCAG CATCACTGCA CGTGGCGCGC
GGCACCGTCG TCGACGCGTA CGCGCAGCTC ATCGCCGAAG GCTTTCTCGA ATCGCGCGGC
GGCGCGGGCA CGCGGGTCGC GAATGCGCTC GCGGAACCAT CGCCCGGCAA CACTTCGGAA
TCGCCCACGC CGCGCGTGGA CCCGGCGCGC CACGCCCTGC CCGAACCGGC CGCCGCCTTC
GCGCGGCTCG CCCGCGAATT CAGCCCGCTG CCGGCGATGC CGTTCGCGAT CTCGGTGCCG
CTCGGCCTCA CCGCGCCCGA CGACATCTGG CGCCGGCTCG GCAACCGCCT GCGCGCCCGC
GGCGCCGGCG CGCCGTCCGG CTATGCCGAT CCGCAAGGCG CGCTGCCGCT GCGCGAAGCG
ATCGCCGACT ACGTGCGCCG GTCGCGCTCG GTGCGCTGCG ATGCCGGCCA GGTCGTGATC
ACGAGCGGCA CGCAGCAGGG GCTGCATCTC GCGAGCCAGG TGCTGCTCGG CGCAAACGAC
CGCGCATGGG TCGAGAATCC GGCCTATCGC GGCATCACCG CGCTGCTCGA AAGCACCGGG
CGGCGCGATG CGATGGTGCG CGTGCCGGTC GACGCCGACG GCCTCGACGT CGACGCCGGC
ATCCGCGTCG CGCCCGATGC GCGCGCCGCA TTCGTCACGC CGTCGCATCA GTACCCGCTC
GGCATGCCGC TGAGCATGGC GCGGCGCAAT GCGCTGCTGG CATGGGCGCG CACGCACCGC
GCATGGATCG TCGAGGACGA CTACGACAGC GAGCTACGCT ACGAAGGCTA CCCATTCCCG
TCGCTGCAGG GCCTCGCGCC CGATCGCGTG ATCTATCTCG GCACCTTCAG CAAGATCCTG
TTTCCGTCGC TGCGGCTCGG CTACGTGATC GCGCCCGACG ATCTCGTGCC TGCGTTCTGC
GGCGCGCGCG TGCTGATGGA CCGCCACGCG CCGACCGCCG ACCAGCACGT GCTCGCCGCG
TTCATCGCCG AAGGACATCT CGATCGCCAC ATCCGCCGCG TGCGCGGCGT CTATGCGGAA
CAGCGCGCGG CGCTGATCGA CACGCTCGGC GCGCGGCTGC CGCGCGAGCG CGCATGGGTA
CAGCCGGGCG ACCAGGGGAT GCACGTCGTG CTGTGGCTCG CGGCAGGCAT CGACGATCTC
GACGTGGTCG CGCGCGCCGC CCAGGCCGGT GTCGCGGTGC GTGCGGTGTC GCCGATGTTC
GCGCCCGGCA CCGCGCGCCC CGGGCTCGTG CTCGGCTTCG GCGGGTTCGG CCGCGCGCAG
ATGGAAGCGG CCGCGCAGCG GCTCGCGGAC GTGGTTTCGT CGGTGGAATC GCGGCCCCGC
GCACGGTAA
 
Protein sequence
MARTARIVEI PSLGVLDRAA GDLSRQLAQA LRDAVRRGDV RPGDTLPSTR LLAASLHVAR 
GTVVDAYAQL IAEGFLESRG GAGTRVANAL AEPSPGNTSE SPTPRVDPAR HALPEPAAAF
ARLAREFSPL PAMPFAISVP LGLTAPDDIW RRLGNRLRAR GAGAPSGYAD PQGALPLREA
IADYVRRSRS VRCDAGQVVI TSGTQQGLHL ASQVLLGAND RAWVENPAYR GITALLESTG
RRDAMVRVPV DADGLDVDAG IRVAPDARAA FVTPSHQYPL GMPLSMARRN ALLAWARTHR
AWIVEDDYDS ELRYEGYPFP SLQGLAPDRV IYLGTFSKIL FPSLRLGYVI APDDLVPAFC
GARVLMDRHA PTADQHVLAA FIAEGHLDRH IRRVRGVYAE QRAALIDTLG ARLPRERAWV
QPGDQGMHVV LWLAAGIDDL DVVARAAQAG VAVRAVSPMF APGTARPGLV LGFGGFGRAQ
MEAAAQRLAD VVSSVESRPR AR