Gene Bcen_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3096 
Symbol 
ID4095868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp128188 
End bp129768 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content67% 
IMG OID638016396 
Productamino acid permease-associated region 
Protein accessionYP_622965 
Protein GI107025454 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0833] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.552339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTCAG ATGCCCGCCC CGATTCGTCC CGCCCGTCCG CCTCGCCCCC TGCGAAGCCC 
TCCCTCCACC GCGCGTTGCA GGCCCGCCAT CTGCGGATGA TCGCGATCGG CGGCTCGATC
GGCACGGGCC TGTTCGTCGC GTCCGGCGCA TCGATCTCGC AGGCCGGCCC CGGTGGCGCG
ATGCTCGCGT ACATGCTGAT CGGCCTGATG GTCTATTTCC TGATGACGAG CCTCGGCGAA
ATGGCCGCGT TCATGCCGGT GTCGGGCTCG TTCGCGACCT ACGGCGCGAA GTTCGTCGAC
GAAGGCTTCG GCTTCGCGCT CGGCTGGAAC TACTGGTACA GCTGGGCCGT GACGCTGGCG
GTGGAGCTCG TCGCCGCGCA GCTCGTGATG CACTACTGGT TCCCGCACGT GCCGGGCGTC
TGGTGGAGCG CGCTGTTCCT CACGCTGATC TTCGCGCTCA ACGCGCTGTC GGTGCGCGGC
TTCGGCGAGG CCGAATACTG GTTCGCGCTG ATCAAGGTAC TCACCGTGCT CGCGTTCGTC
GGCGTCGGCC TGCTGATGAT CTTCGGGATC ATGCAGGGCG GCCCGAGCGC CGGCTGGGGC
AACTTCACGA TCGGCGACGC GCCGTTCGTC GGCGGCTGGG CGACGATGCT CGGCGTCGCG
ATGATCGCGG GCTTCTCGTT CCAGGGTACC GAGATGATCG GCGTCGCGGC CGGCGAATCG
GAGAACCCGC GCACGACGAT TCCGCGTGCG GTGAGCCAGA TCTTCTGGCG CATCCTGCTG
TTCTACGTGT TCGCGATCTT CGTGATCGGC GTGCTGGTTC CGTACACCGA TCCGAGCCTG
CTGAAGAGCG ACGTGACCGA TATCGGCGTG AGCCCGTTCA CGCTGGTGTT CCGCCACGCG
GGTCTCGCCT TTGCCGCTGG CGTGATGAAC GCGGTGATCC TGACGGCCGT GCTGTCGGCC
GGCAACTCGG GCATGTACGC GTCGACGCGG ATGCTCTACA ACCTCGCGGT CGAAGGCCGC
GCGCCGAAGC TGTTCGCGAA ACTGTCGCCC GGCGGCGTGC CGCGCAACGC GCTGTATGCG
ACGACCGCCG TCGGCGCGCT GTGTTTCCTC ACGTCGCTGT ACGGCGACAA GACGGTCTAC
CTGTGGCTGC TGAACACGTC GGGCATGGCC GGCTTCATCA CGTGGCTCGG CATCGCGGTC
AGCCACTACC GCTTTCGCAA GGGTTTCCTG AAGCAGGGCT ACCGGCTCGA CCAGTTGCCG
TACCGGTCGA AGTGGTTCCC GTTCGGCCCG CTGTTCGCGT TCGCGCTGTG CGCGGTCGTC
GCGCTCGGCC AGGACTATCA GGCGTTCCTC GCCGACAAGA TCGACTGGGC GGGTGTCGCA
GCAACCTACA TCGGCTTGCC GTTCTTCCTC GCGATCTGGC TCGGCTACGC GCTCGTGCGC
AAATGCCGGC TGGTGCGCTA CGAGGACATG GAAATCGCGC CGTGGATCGA ACGCAACGCG
ACACATGAAG CTGCCCAAAA GGCTGATGCC AGCTATCCGG CCTATGTCGC CCGCCCGGTC
AACCCGACGC CGGGCGCCTG A
 
Protein sequence
MHSDARPDSS RPSASPPAKP SLHRALQARH LRMIAIGGSI GTGLFVASGA SISQAGPGGA 
MLAYMLIGLM VYFLMTSLGE MAAFMPVSGS FATYGAKFVD EGFGFALGWN YWYSWAVTLA
VELVAAQLVM HYWFPHVPGV WWSALFLTLI FALNALSVRG FGEAEYWFAL IKVLTVLAFV
GVGLLMIFGI MQGGPSAGWG NFTIGDAPFV GGWATMLGVA MIAGFSFQGT EMIGVAAGES
ENPRTTIPRA VSQIFWRILL FYVFAIFVIG VLVPYTDPSL LKSDVTDIGV SPFTLVFRHA
GLAFAAGVMN AVILTAVLSA GNSGMYASTR MLYNLAVEGR APKLFAKLSP GGVPRNALYA
TTAVGALCFL TSLYGDKTVY LWLLNTSGMA GFITWLGIAV SHYRFRKGFL KQGYRLDQLP
YRSKWFPFGP LFAFALCAVV ALGQDYQAFL ADKIDWAGVA ATYIGLPFFL AIWLGYALVR
KCRLVRYEDM EIAPWIERNA THEAAQKADA SYPAYVARPV NPTPGA