Gene Bcen_3074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3074 
Symbol 
ID4096133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp102612 
End bp104036 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content65% 
IMG OID638016374 
Productmajor facilitator transporter 
Protein accessionYP_622943 
Protein GI107025432 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACA GCCCCGCCCA AAGTGGTCGG ACGACCGACT TCTTGCCATA CCTCGTCGCC 
GCGACGTTCT TCATGGAGTA CCTTGATACG ACCGTGATCG CGACGGCGCT ACCGCAAATG
GCCCACTCGT TCGGCGTGGG GCCTAACGCG CTGAGTCTCG GGATGACGGC CTACATGTTG
GCGCTGGCGG TGTTCATTCC GATCAGCGGC TGGATCGCGG ATCGCTATGG CTCGCGCACC
GTGTTCGCGA GTGCGATCGT CGTCTTTACC GGCGCGTCGG TGCTGTGCGG GCTGTCCGAA
GGCGTGATGT CGTTCACGGC AGCCCGGCTG CTGCAGGGTG TCGGCGGGGC GATGATGGTG
CCGGTCGGGC GAATGATCGT CGTGCGAAGT ACCGAGAAGG CGAAGCTGAT GCGTGCGATC
GCGACGATCA CGTGGCCGGG CATCGTCGCC CCCGTCGTCG GGCCGCCGAT CGGCGGCTTC
ATCACGACCT ACGCGTCGTG GCGATGGATC TTCCTGTTGA ACGTCCCGTT CGGCCTTGCC
GCACTCGTTT GTACCTGGCT GATCGTCCGT AACACGCGGG CCGACGAGCA ACGGCCGCTC
GACTGGGTTG GCTTCGTGCT GGCCGGTGGC GCATTGACCT GCTTGCTGAT CGGCACCGAA
GCGGCCGGCC AGCAGGATGT CGACTTCACG CGCGCGGGTG TCCTGGTGGG CGCAAGCGTG
CTGTTCGGTA TCGCTGCGTG GCTGTATGCG CGACGCTGCG CGCATCCGCT GCTCGATTTC
ACGACGCTGA AGGTGCCGAC GTTCTCGGTG ACGGTCATCA CCGGCTCGAT CACGCGGATG
GCGATCAACG CCGTCCCGTA CCTGCTGCCG CTGCTGTTCC AGATCGGCTT CGGGCTGTCG
CCATTCCAGT CAGGTCTGCT GCTGCTCGCG AGTGCACTCG GCAACCTCGG GATGAAGGCG
GGCACGTCTT GGATACTCGA CCGTTACGGC TTTCGGCGTG TCGCGCTCGT CGACGTGACG
ATCGTCGGCA TCTTCATGAT CGCATGCGGT TGGCTGACCG CGTCGACGCC GCTGGCGATC
ACGCTGCTCC TCGTATTCGT CTATGGGCTC ACGCGGTCGA TGCAGTTCAC GACGCTCGCG
ACGCTGGCTT ATGCGGATAT CCCCTCTCAC CAGACGAGCG CGGCCAGCAC GCTGTGGAGC
GCCGCGCAGC AAATGACGAT CGGGATGGGG ATCGCGTTCG GTGCATTGTC GCTGCGGCTC
GCAGCATTGG TGCGCGGCGA TGCGGCTGGC ATGCACTACG TGCTCGCCGA TTTCCGCTGG
GCGTTTATCG CGGCGGGCGT GCTCGCGCTG CTTACGTTGC CGGGCTATGC ACGGCTGGCT
TCCGATGCCG GCGACCGGCT GCGGGCCAAC ATGGCGCGGG GATAG
 
Protein sequence
MTDSPAQSGR TTDFLPYLVA ATFFMEYLDT TVIATALPQM AHSFGVGPNA LSLGMTAYML 
ALAVFIPISG WIADRYGSRT VFASAIVVFT GASVLCGLSE GVMSFTAARL LQGVGGAMMV
PVGRMIVVRS TEKAKLMRAI ATITWPGIVA PVVGPPIGGF ITTYASWRWI FLLNVPFGLA
ALVCTWLIVR NTRADEQRPL DWVGFVLAGG ALTCLLIGTE AAGQQDVDFT RAGVLVGASV
LFGIAAWLYA RRCAHPLLDF TTLKVPTFSV TVITGSITRM AINAVPYLLP LLFQIGFGLS
PFQSGLLLLA SALGNLGMKA GTSWILDRYG FRRVALVDVT IVGIFMIACG WLTASTPLAI
TLLLVFVYGL TRSMQFTTLA TLAYADIPSH QTSAASTLWS AAQQMTIGMG IAFGALSLRL
AALVRGDAAG MHYVLADFRW AFIAAGVLAL LTLPGYARLA SDAGDRLRAN MARG