Gene Bcen_3067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3067 
Symbol 
ID4096121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand+ 
Start bp88989 
End bp90080 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content65% 
IMG OID638016362 
ProductABC transporter periplasmic-binding protein 
Protein accessionYP_622936 
Protein GI107025425 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4143] ABC-type thiamine transport system, periplasmic component 
TIGRFAM ID[TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR03227] 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate binding protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.127261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTGC AGAAACCCTC GCGCGCCGCC GCCGGCGCGT TCCGCAAGCT CGCGCTGGCC 
GCCTGCGCCG CCGGTCTGCT GCAAGGCGCC GCGATGCCGG CGCATGCGGC GAACGCGGTC 
GTGCTGTACA CGGCGGACGG CCTCGAGAAC CTCTATCGCG ATGTGCTGCC GGCTTTCGAG 
AAGAAGGAAG GCGTGAAGGT CAATATCGTG ACGGCGGGCA GCGGCGAGGT GGTGAACCGC 
GCGAACATCG AGAAGAATTC CCCGAAGGCC GACGTGATCG TCACGTTGCC GCCGTTCATC 
CAGCAAGCCG GCCAGATGGG TCTGCTGCAG CCGTACCAGA GCGTGAACTA CAAGAACGTG 
CCGGCCATTG CGAAGGCCGA GGACGGCACG TGGGCGACCT TCGTGAACAA CTACTTCTCG 
TTCGCGATCA ACCCGGACGT CGTGAAGAAC CAGCCGAAGA CGTTTGCCGA CCTGTTGTCG 
CCCAGCTATG CCGGCAAGGT CGCGTACTCG AACCCGGCCA CGGCCGGCGA CGGGATGGCC 
GTGCTGATCC TGACGACGTC GCTGATGGGC GAGGACAAGG CGTTCGACTA CCTCGCGAAG 
CTGTCGCAGA GCGTGAAGTT CCACACGAAG GGTACGGGCT ACCTGAACGT GCTGCTGTCG 
CGTAACGAGA TCAGCGTCGC GAACGGCGAC CTGCAGATGG ATCTCGACGA CGCCGAACAC 
GGCGCGCTGT CCGTCAAGCC GATCTTCCTG GCCGCGAAGG CCGGCGACCA GCCGACCACG 
TTTCAGCTCC CGTACGGCAT CGGCCTGATC AAGAGCGGCC CGAACCAGGA CGCCGGCAGG 
AAGCTGATCG ACTACCTGAT GTCGACGGAA GTGCAGTCGA AGGTGCCGGA CATGTACGGC 
ATCCCGGGCC GCACCGACGT GCCGCTGGCC GGCAAGAACG GCGAAGCGGT CAAGAAGGCG 
ATCGCGGGCG TGAAGCTGAT TCCGGTCGAC TGGACCCAGG TGATGGCGAA GAAGCCGGAA 
TGGATCGAGC GCTGGAAGAA GGACGTGATC GGCAGCTCGG GCAAGCAGCT CGACGTCGTC 
AAGCCGAAGT GA
 
Protein sequence
MTLQKPSRAA AGAFRKLALA ACAAGLLQGA AMPAHAANAV VLYTADGLEN LYRDVLPAFE 
KKEGVKVNIV TAGSGEVVNR ANIEKNSPKA DVIVTLPPFI QQAGQMGLLQ PYQSVNYKNV 
PAIAKAEDGT WATFVNNYFS FAINPDVVKN QPKTFADLLS PSYAGKVAYS NPATAGDGMA 
VLILTTSLMG EDKAFDYLAK LSQSVKFHTK GTGYLNVLLS RNEISVANGD LQMDLDDAEH 
GALSVKPIFL AAKAGDQPTT FQLPYGIGLI KSGPNQDAGR KLIDYLMSTE VQSKVPDMYG 
IPGRTDVPLA GKNGEAVKKA IAGVKLIPVD WTQVMAKKPE WIERWKKDVI GSSGKQLDVV 
KPK