Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3058 |
Symbol | |
ID | 4096054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 79500 |
End bp | 80678 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638016353 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_622927 |
Protein GI | 107025416 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGCGG CGGCCCAACC ACGCCATCAA GGGGAAGTGA AAGTGAAGCT GAAGGTATCG CACGTCGCGC TGGCCGCCGC CTGCGCACTG TCGGGCGCGC ACGCCGTCGC CGCCGACGTC GTCAAGATCG GTTTCGCCGC ACCGCTGACC GGCCCGCAGT CGAATTACGG CACGGACATG CAGAAGGGCG TGCAGCTCGC GATCGCCGAT TTCAACGCGA CGCATCCGAC GATCGGCGGC AAGCCCGTCA CGTTCCAGCT CGACTCGCAG GACGACCAGG CCGACCCGCG CACCGGCACG ACCGTCGCGC AGCGGCTGAT CGACGACAAC GTCCGCGGGA TCATCGGCCA CTTCAACTCG GGCACCAGCA TTCCGGCGTC CGACCTGTAC GATCGCGCGG GGCTGCCGCA GATCTCGATG GCGACGTCGC CGCAATACAC CGCGCGCGGC TACAAGACGA CCTACCGGCT GCTGACGAGC GACGCGCAGG CCGGCCGCAT CGTCGGCACG TACGCGGTCA AGACGCTGCG CTTCAAGCGC ATCGCGATCA TCGACGACCG CACCGCCTAC GGCCAGGGCA TCGCCGACGA ATTCGCGAAG GCCGTGGAAG CGGCCGGCGG CACGATCGTC AAGCGCGACT TCACGAACGA CAAGGCGCTC GATTTCTCGG CGATCCTGAC CAACCTGAAG GGCGTGAATC CAGACGCGGT CTTCTACGGC GGCGGTGACG CGCAATCGTC GCCGATGATC CGCAAGATGC GCCAGCTCGG GATGAAGTCG GCGTTCGTGA CGGGCGAAAT GTCGCGCTCG CCGACGTTCC TGAAGGTCGG CGGCGACGCG GCCGAAGGCG CGATCGTCTA CATGGGCGGG CTGCCGAAGG AAAAGATGCC GGGCTTCTCC GGCTACGCGG CACGCTACAA GGCGCGCTTC AACGAAGACG TGATCACGTA CTCGCCGTAT TCGTACGACG GCACGATCGC GCTGCTCACC GCGATGAAGG ACGCGAACTC GACCGACCCG AAGGTGTACA CGCCGTATCT CGGCAAGGTG TCGATCAAGG GCGTGTCGGC GCCCAGCATC GCGTACGACC CGAAGGGCGA CCTGAAGGAC GCACCGGTCA CGATCTACAA GGTCGAGCGC GGCGCGTTCA AGCCGGTCGA TACGATCGCC GGCAACTGA
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Protein sequence | MPAAAQPRHQ GEVKVKLKVS HVALAAACAL SGAHAVAADV VKIGFAAPLT GPQSNYGTDM QKGVQLAIAD FNATHPTIGG KPVTFQLDSQ DDQADPRTGT TVAQRLIDDN VRGIIGHFNS GTSIPASDLY DRAGLPQISM ATSPQYTARG YKTTYRLLTS DAQAGRIVGT YAVKTLRFKR IAIIDDRTAY GQGIADEFAK AVEAAGGTIV KRDFTNDKAL DFSAILTNLK GVNPDAVFYG GGDAQSSPMI RKMRQLGMKS AFVTGEMSRS PTFLKVGGDA AEGAIVYMGG LPKEKMPGFS GYAARYKARF NEDVITYSPY SYDGTIALLT AMKDANSTDP KVYTPYLGKV SIKGVSAPSI AYDPKGDLKD APVTIYKVER GAFKPVDTIA GN
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