Gene Bcen_3049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3049 
Symbol 
ID4096045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp70069 
End bp70983 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID638016344 
Product5-dehydro-4-deoxyglucarate dehydratase 
Protein accessionYP_622918 
Protein GI107025407 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.62883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCAC CGCAAGAACT CAAACAGATC ATCTCCCACG GCCTGCTGTC GTTTCCGCTG 
ACGGATTTCG ACGCCGACGG CAGCTTCCGC CCGAGCACCT ATGCCGAGCG TCTGGAATGG
CTGGCGCCGT ATGGCGCGAG CGCGCTGTTC GCGGCCGGCG GCACCGGCGA ATTCTTCTCG
CTCACGCAGC GCGAGTACTC GGACGTGATC CGCGTCGCGA CGGAAACCTG CAAGGGCAAG
GTGCCGATCC TCGCCGGCGC GGGCGGCGCG ACGCGCGTTG CGATCGAATA TGCGCAGGAA
GCCGAGCGCC TCGGCGCGAG CGGCGTGCTG CTGATGCCGC ACTACCTGAC CGAAGCGAGC
CAGGAAGGGA TCGCCGACCA CGTCGAGCAG GTGTGCCGCG CGCTGAAGAT CGGCGTCGTG
GTGTACAACC GCGCGAATTC GAAGCTGAAT GCGGACATGC TGGAGCGCCT TGCCGACCGT
TGCCCGAACC TGATCGGTTT CAAGGACGGC GTCGGTGAAA TCGAGAGCAT GGTGACGATC
CGCCGTCGCC TCGGCGATCG CTTCGCGTAC CTCGGCGGCC TGCCGACGGC CGAAGTCTAT
GCAGCCGCGT ACAAGGCGCT CGGCGTGCCG GTGTACTCGT CGGCCGTGTT CAACTTCATC
CCGAAGACGG CAATGGCATT CTACGAAGCG ATCGCGAAGG ACGACCACGC AACCGTCGGC
CGCCTGATCG ACGAGTTCTT CCTGCCGTAC CTGAAGATCC GCAATCGCCG CGCGGGCTAC
GCGGTCAGCA TCGTGAAGGC GGGCGCGAAG CTCGTCGGCC ACGACGCGGG CCCGGTGCGC
GCACCGCTCG TCGACCTGAC CGACGAAGAA GCGGCCGAAC TCGACGTGCT GATCAAGAAG
ATGGGCCCGC AGTAA
 
Protein sequence
MTSPQELKQI ISHGLLSFPL TDFDADGSFR PSTYAERLEW LAPYGASALF AAGGTGEFFS 
LTQREYSDVI RVATETCKGK VPILAGAGGA TRVAIEYAQE AERLGASGVL LMPHYLTEAS
QEGIADHVEQ VCRALKIGVV VYNRANSKLN ADMLERLADR CPNLIGFKDG VGEIESMVTI
RRRLGDRFAY LGGLPTAEVY AAAYKALGVP VYSSAVFNFI PKTAMAFYEA IAKDDHATVG
RLIDEFFLPY LKIRNRRAGY AVSIVKAGAK LVGHDAGPVR APLVDLTDEE AAELDVLIKK
MGPQ