Gene Bcen_3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3040 
Symbol 
ID4096167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand+ 
Start bp61849 
End bp62475 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content68% 
IMG OID638016335 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_622909 
Protein GI107025398 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.408857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCACG TCGCCTGGCT GCCGTTCATG GCCACCTCCC TTCTGATCAT TCTGACGCCC 
GGCCAGGACA TGGTCCTCGT GATGTCGCGC ACGCTGTCCG GCGGCACGCG CGCGGGCCTC 
GTGACCGCCG CGGGTGTCAG CGTCGGGCTG CTCGTGCATA CGATGCTCGC GACGCTCGGG 
CTGGGCGCGC TGCTTCAGGC TTCCGAATGG CTGTTCACGG CGCTGAAGGT GGTGGGCGCG 
CTGTACCTGC TGTACCTCGG CATCACGCTG TTGCGTTCGT CGGGCGAGCT GACGCTCGCA 
GGCGACGGCA CTGCGCCGGC ATCGCGGCTG CGGACGTTCG CGCAAGGCGC GCTGTCCAAT 
GTATCCAATC CGAAGGTCGC GCTTTTCTAT CTGGCGTTTC TGCCGCAATT CGTTCCGGCC 
GGCGCCCCGC ATCCGATGCT GTCGCTGTTC GTGCTGGGCG CGACGTTTGC CGGGCTGACG 
TTTCTCGTCA AGGGGCCGGT CGCGCTGTTC GCGGGCCTGC TGTCGGCATC GATCCGCCGC 
AACCCGCGCA TCCTGACGCG CATGCATCGC GTCAGCGGGG TGGTCTTGCT CGCGCTGGGC 
GTGAAGCTGG CGCTCGAACG CCGCTGA
 
Protein sequence
MSHVAWLPFM ATSLLIILTP GQDMVLVMSR TLSGGTRAGL VTAAGVSVGL LVHTMLATLG 
LGALLQASEW LFTALKVVGA LYLLYLGITL LRSSGELTLA GDGTAPASRL RTFAQGALSN 
VSNPKVALFY LAFLPQFVPA GAPHPMLSLF VLGATFAGLT FLVKGPVALF AGLLSASIRR 
NPRILTRMHR VSGVVLLALG VKLALERR