| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3016 |
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| Symbol | |
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| ID | 4095268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | + |
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| Start bp | 36503 |
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| End bp | 38044 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638016311 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_622885 |
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| Protein GI | 107025374 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACT TGCACAACAC GAACGGCCTG ATGCGCTTCG CGAAGGTGGC GGCCGCGAGC
ACCCTGCTCG CGACGCTGCT CGCCGCGTGC GCGGTCGGCC CCGATTACAA GCGTCCGGAC
GCGGCGGCGC CCGCCGCGTT CAAGGAAGCG CCGACCCTCG CCGCCGGCGA GCAGGCCGGC
ACGTGGAAGA CGGCCGAGCC GGCGGACGGC GAACATCGCG GCGAATGGTG GAAGGTGTTC
GGCGACCCGG TGCTCGATTC GCTCGAGACG CAGGCGCTCG CCGCGAACCA GAACCTGAAG
GCCGCGGCCG CGCGGGTCGA GGAAGCGCGT GCGGCGACCC GGTCGGCACG CTCGCAATGG
TTCCCGCAGG TCGGCGCTGG TTTCGGGCCG ACGCGCGAGG GGCTGTCGTC GGCGTCGCAG
TTCCAGCCGC AGGGCACCGG CCCGACCAAC GCGACGCTGT GGCGCGCGCA GGGCACGGTG
TCGTACGAAG CCGACCTGTT CGGCCGCGTC GGCCGCAACG TCGAGGCGTC GCGCGCCGAC
CAGGCGCAGA GCGAAGCGCT GTTCCGCTCG GTGCAGCTCG CGTTGCAGGC CGACGTCGCG
CAGAACTACT TCGAATTGCG TCAGCTCGAT TCGGATCAGG ACCTGTACCG CCGCACGGTG
GAGTTGCGCG AGCAGGCGCT GAAGCTCGTG CAGCGCCGCT TCAACGAAGG CGACATCAGC
GAGCTCGACG TGTCGCGCGC GAAGAACGAA CTGGCGAGCG CGCAGGCCGA TGCGGTCGGC
GTCGCGCGCC GGCGCGCGGC GTCCGAGCAT GCGCTGGCCA TTCTGCTCGG CAAGGCGCCT
GCGGATTTCG CGTTCAAGGA AACGCCGATC GTGCCGGTCG CGGTGAAGAT TCCGCCGGGC
CTGCCGTCCG CGCTGCTCGA ACGCCGCCCG GACGTGTCGG CGGCCGAGCG CGCGATGGCG
GCCGCGAACG CGCGGATCGG GCTCGCGAAG TCGGCGTACT TCCCGAAGCT CGATATCACC
GGGTCGTTCG GGTATGAAGC GTCGACGCTC GGCAACCTGT TCCTGTGGTC GAGCCGCACG
TTCCTGCTCG GGCCGTTCGC CGGCACCGCG CTGACGCTGC CGCTGTTCGA CGGCGGGCGG
CGGGCTGCTG GTGTGCAGCA GGCGCGCGCG CAGTACGACG AGCAGGTCGC GAACTACCGG
CAGCAGGTGC TCGTCGCGTT CCGCGAGGTC GAGGACAATC TTGCTGATCT GCGTTTGCTC
GATGATCAGA TCCGCGCGCA GGATGCGGCC GTCAACGCGT CGCGTCGGGC GGCGACGTTG
TCGCGCACGC AATATCAGGA AGGTGAGGTC GCGTATCTCG ACGTGATCGA CAGTGAGCGG
TCGGTGTTGC AGTCGCAGTT GCAGGCGAAC CAGTTGACGG GGGCGCAGGC GGTGTCGACC
GTCAACCTGA TCCGCGCGCT GGGCGGCGGG TGGGGGAATG CGCCGGCGCC GACGGCGGTG
GGTGATGCGG CGTCTGGCAA GGCTGACGTA GCTGCGCGGT AA
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| Protein sequence | MNNLHNTNGL MRFAKVAAAS TLLATLLAAC AVGPDYKRPD AAAPAAFKEA PTLAAGEQAG
TWKTAEPADG EHRGEWWKVF GDPVLDSLET QALAANQNLK AAAARVEEAR AATRSARSQW
FPQVGAGFGP TREGLSSASQ FQPQGTGPTN ATLWRAQGTV SYEADLFGRV GRNVEASRAD
QAQSEALFRS VQLALQADVA QNYFELRQLD SDQDLYRRTV ELREQALKLV QRRFNEGDIS
ELDVSRAKNE LASAQADAVG VARRRAASEH ALAILLGKAP ADFAFKETPI VPVAVKIPPG
LPSALLERRP DVSAAERAMA AANARIGLAK SAYFPKLDIT GSFGYEASTL GNLFLWSSRT
FLLGPFAGTA LTLPLFDGGR RAAGVQQARA QYDEQVANYR QQVLVAFREV EDNLADLRLL
DDQIRAQDAA VNASRRAATL SRTQYQEGEV AYLDVIDSER SVLQSQLQAN QLTGAQAVST
VNLIRALGGG WGNAPAPTAV GDAASGKADV AAR
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