| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2947 |
|---|
| Symbol | |
|---|
| ID | 4093184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 3254961 |
|---|
| End bp | 3256688 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638016242 |
|---|
| Product | AMP-binding domain protein |
|---|
| Protein accession | YP_622816 |
|---|
| Protein GI | 107024489 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.768033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAG ACCTTGGCAA GGGGGCGCTG ATCGCGCCCG AAAACGGACT GTCGTACGTG
CGCGGCGCGA CCGACGTGCC GCTATCCGAC GCGACGATCG GCCGGTTCCT GCTCGACACG
GCCGGCCGCT TCCCCGACCG CCCGGCGGTC GTGTTCCGCG AGCAGCAGGT GCGCTGGACC
TGGCGCGAGT TCGCGAACGA GATCGATGTG CTGGCCGCAG GCCTCGCCGC GCTCGGGATC
GTGAAGGGCG ACTGCGTCGG CATCTGGTCG CCGAACCGCA GCGAATGGCT GCTCACGCAG
TTCGCGACCG CGCGGATCGG CGCGGTGCTC GTCAACATCA ACCCGGCCTA CCGGCTGTCG
GAACTCGAAT ACGCGCTGAA CAAGGTCGGC TGCAAGGCCG TGATCGCGGC CGAGCGCTTC
AAGAGCTCCG CGTACGTCGA GATGCTGCAG ACCCTCGCGC CGGAGCTCGC GACCGCGACG
CCGGGCGACC TGCATGCGGC GCGCGTGCCG AAACTGCGCA CGATCGTGTC GATGGGCGAG
GTGGCGCCTG CCGGCATGTT CCGCTTCGCG GACGTGATGG CGCGCGGCCG TCAGGCCGTC
GATCCGGCGC TGCTCGATGC GATCGGCGCG GCGCTCACGG CCAACGATCC GATCAATATC
CAGTTCACGA GCGGCACGAC CGGCAGCCCG AAGGGCGCGA CGCTCACGCA CCGCAACGTC
GTCAACAACG CGCGCTCGAT CGCGATGGCG ATGCGTTTCA CCGAACAGGA TTCGCTCTGC
ATCCCGGTGC CGCTCTATCA CTGTTTCGGG ATGGTGCTGG CCGTGCTCGC CTGCGTGTCG
ACGGGCGCCG CGATGGTGTT TCCCGGCGAA GCGTTCGACC CGGTGGCGAC GCTCGCGGCG
GTGGCCGAGG AGCGCTGCAC CGCGCTGCAT GGCGTGCCGA CGATGTTCAT CGCCGAACTC
GATCATCCGG CATTCCCGAC ATTCCACCTG TCGACGCTGC GCACCGGGAT CATGGCCGGC
TCGCCGTGCC CGATCGAGAC GATGAAGCGC GTCGTGTCGC AGATGCATCT TTCCGAAATC
ACGATCGCGT ACGGGATGAC GGAGACGAGC CCCGTGTCGT TCCAGAGCTC GACCGACGAT
CCGCTGGAAA AGCGCACGAC GACGGTCGGC CGCATCCAGC CGCATCTCGA AGTGAAGATC
GTCGATCCGA GCGGCGACAT CGTGCCGGTC GGCGCGACGG GCGAGCTGTG CACGAAGGGC
TATTCGGTGA TGCTCGGCTA CTGGGACGAC GACGCGAAGA CGCGCGAGGT GCTGGTCGAC
GGCTGGATGC ATACGGGCGA CCTCGCGACG CTCGACGCGG ACGGCTACTG CAACATCGTC
GGTCGCCTGA AGGACATGGT GATTCGCGGC GGCGAGAACG TCTATCCGCG CGAGATCGAG
GAATTCCTGT TCCGCCATCC GAAGATCCAG AGCGCGCAGG TATTCGGCGT GCCCGATGCA
AAGTACGGCG AGGAGCTGTG CGCGTGGATC GTGCTGCGCG CGGACGAGCA GATGACCGAG
GACGACGTGC GCGCGTTCTG CACCGGGCAG ATCGCGCACT ACAAGATTCC GCGCTATATC
CGCTTCGTCG ACGAGCTGCC GATGACGGTG ACGGGCAAGG TGCAGAAGTT CGTGATGCGC
GAGCGGATGA TCGAGGAGCT GAAGCTCGAC GTGCAGAAGA CTGCGTGA
|
|---|
| Protein sequence | MAADLGKGAL IAPENGLSYV RGATDVPLSD ATIGRFLLDT AGRFPDRPAV VFREQQVRWT
WREFANEIDV LAAGLAALGI VKGDCVGIWS PNRSEWLLTQ FATARIGAVL VNINPAYRLS
ELEYALNKVG CKAVIAAERF KSSAYVEMLQ TLAPELATAT PGDLHAARVP KLRTIVSMGE
VAPAGMFRFA DVMARGRQAV DPALLDAIGA ALTANDPINI QFTSGTTGSP KGATLTHRNV
VNNARSIAMA MRFTEQDSLC IPVPLYHCFG MVLAVLACVS TGAAMVFPGE AFDPVATLAA
VAEERCTALH GVPTMFIAEL DHPAFPTFHL STLRTGIMAG SPCPIETMKR VVSQMHLSEI
TIAYGMTETS PVSFQSSTDD PLEKRTTTVG RIQPHLEVKI VDPSGDIVPV GATGELCTKG
YSVMLGYWDD DAKTREVLVD GWMHTGDLAT LDADGYCNIV GRLKDMVIRG GENVYPREIE
EFLFRHPKIQ SAQVFGVPDA KYGEELCAWI VLRADEQMTE DDVRAFCTGQ IAHYKIPRYI
RFVDELPMTV TGKVQKFVMR ERMIEELKLD VQKTA
|
|---|
| |