Gene Bcen_2802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2802 
Symbol 
ID4091688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp3080309 
End bp3081514 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content71% 
IMG OID638016097 
Productsecretion protein HlyD 
Protein accessionYP_622673 
Protein GI107024346 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCGACC ACAATCTGGA CAAACTGAAA ATCGACCGGC GTCCGATCGC ACCGGTGCCG 
CGTCGGCGCC GGTGGGCCCG CTACGCGGTC GCCGCCGCGC TGATCGTCAT CGCGATCGGC
GCCGGCCTCG CCCTCACCGG CCGGCCGACC GTCGACACCA CCTCCGTCAC GTCCGCCTAC
CCGTACCAGA ACGACACGCA ACTCAACGCG ACCGGCTACG TCGTGCCGCA GCGCAAGGCC
GCGGTCGCGT CGAAGGGCCA GGGGCGCGTC GAATGGCTCG GCGTGCTCGA AGGCACGCGC
GTGAAGAAGG ACGAGATCAT CGCGCGCCTC GAAAGCAACG ACGTGCAGGC GTCGCTTGCG
CAGGCGCGCG CGCAGGTGCA GGTCTCCCGC GCGAACCTCG GCGTCGCGCA GGCCGAGCTG
AAGGACGCCG AGATCGCATT GCGCCGCACG TCCACGCTCG CGCCGAAGGG CGCGGTGCCG
GCCGCGCAGC TCGATATCGA CACGGCGCGC GTGAACAAGG CGCGCGCGAC GCTCGACAGC
GACCAGGCCG CGATCGCGTC GGCCGAAGCG AACGCGCAGG CCGCGCAGGT GGCGGTCGAC
CAGACGGTGA TCCGCGCGCC GTTCGACGGC ATCGTGCTCG CCAAGCATGC GAACGTCGGC
GACAACATCA CGCCGTTCTC GTCCGCGTCG GACAGCAAGG GCGCGGTCGT GACGATCGCC
GACATGGAGA CGCTCGAGGT CGAGGCCGAC GTCGCCGAAT CGAACATCGC GAAGATCCGC
GCCGAGCAGC CGTGCGAGAT CCAGCTCGAT GCGCTGCCCG ACCTGCGCTT CGCGGGCCGC
GTGTCGCGCA TCGTGCCGAC CGTCGACCGT TCGAAGGCCA CCGTGCTCGT GAAGGTGCGC
TTCGTCGACC GCGACGAACG CGTGCTGCCC GACATGAGCG CGAAGATCGC GTTCCTGTCG
AAGCCCGCGT CGGCGCAGGA CCGGCAGCCG GTGACCGCCG TGCAGGCGAG CGCCGTGGTC
GAGCGCGACG GCCGGCCGGT CGTGTTCGTC GTGAAGGACG ACGCCGTGCA TGCGGTGGCC
GTGGCGAAGG GCGCGCGGAT CGGCGAACTC GTCGCGGTGC GCGGCGTGAC ACCCGGCGAC
ACGGTCGTGC TCGCGCCGGG CGCGAAGCTG AAGGACGGCG CGAACGTGAC CGTCGCGAAG
AAGTAG
 
Protein sequence
MPDHNLDKLK IDRRPIAPVP RRRRWARYAV AAALIVIAIG AGLALTGRPT VDTTSVTSAY 
PYQNDTQLNA TGYVVPQRKA AVASKGQGRV EWLGVLEGTR VKKDEIIARL ESNDVQASLA
QARAQVQVSR ANLGVAQAEL KDAEIALRRT STLAPKGAVP AAQLDIDTAR VNKARATLDS
DQAAIASAEA NAQAAQVAVD QTVIRAPFDG IVLAKHANVG DNITPFSSAS DSKGAVVTIA
DMETLEVEAD VAESNIAKIR AEQPCEIQLD ALPDLRFAGR VSRIVPTVDR SKATVLVKVR
FVDRDERVLP DMSAKIAFLS KPASAQDRQP VTAVQASAVV ERDGRPVVFV VKDDAVHAVA
VAKGARIGEL VAVRGVTPGD TVVLAPGAKL KDGANVTVAK K