Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2802 |
Symbol | |
ID | 4091688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 3080309 |
End bp | 3081514 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638016097 |
Product | secretion protein HlyD |
Protein accession | YP_622673 |
Protein GI | 107024346 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCCGACC ACAATCTGGA CAAACTGAAA ATCGACCGGC GTCCGATCGC ACCGGTGCCG CGTCGGCGCC GGTGGGCCCG CTACGCGGTC GCCGCCGCGC TGATCGTCAT CGCGATCGGC GCCGGCCTCG CCCTCACCGG CCGGCCGACC GTCGACACCA CCTCCGTCAC GTCCGCCTAC CCGTACCAGA ACGACACGCA ACTCAACGCG ACCGGCTACG TCGTGCCGCA GCGCAAGGCC GCGGTCGCGT CGAAGGGCCA GGGGCGCGTC GAATGGCTCG GCGTGCTCGA AGGCACGCGC GTGAAGAAGG ACGAGATCAT CGCGCGCCTC GAAAGCAACG ACGTGCAGGC GTCGCTTGCG CAGGCGCGCG CGCAGGTGCA GGTCTCCCGC GCGAACCTCG GCGTCGCGCA GGCCGAGCTG AAGGACGCCG AGATCGCATT GCGCCGCACG TCCACGCTCG CGCCGAAGGG CGCGGTGCCG GCCGCGCAGC TCGATATCGA CACGGCGCGC GTGAACAAGG CGCGCGCGAC GCTCGACAGC GACCAGGCCG CGATCGCGTC GGCCGAAGCG AACGCGCAGG CCGCGCAGGT GGCGGTCGAC CAGACGGTGA TCCGCGCGCC GTTCGACGGC ATCGTGCTCG CCAAGCATGC GAACGTCGGC GACAACATCA CGCCGTTCTC GTCCGCGTCG GACAGCAAGG GCGCGGTCGT GACGATCGCC GACATGGAGA CGCTCGAGGT CGAGGCCGAC GTCGCCGAAT CGAACATCGC GAAGATCCGC GCCGAGCAGC CGTGCGAGAT CCAGCTCGAT GCGCTGCCCG ACCTGCGCTT CGCGGGCCGC GTGTCGCGCA TCGTGCCGAC CGTCGACCGT TCGAAGGCCA CCGTGCTCGT GAAGGTGCGC TTCGTCGACC GCGACGAACG CGTGCTGCCC GACATGAGCG CGAAGATCGC GTTCCTGTCG AAGCCCGCGT CGGCGCAGGA CCGGCAGCCG GTGACCGCCG TGCAGGCGAG CGCCGTGGTC GAGCGCGACG GCCGGCCGGT CGTGTTCGTC GTGAAGGACG ACGCCGTGCA TGCGGTGGCC GTGGCGAAGG GCGCGCGGAT CGGCGAACTC GTCGCGGTGC GCGGCGTGAC ACCCGGCGAC ACGGTCGTGC TCGCGCCGGG CGCGAAGCTG AAGGACGGCG CGAACGTGAC CGTCGCGAAG AAGTAG
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Protein sequence | MPDHNLDKLK IDRRPIAPVP RRRRWARYAV AAALIVIAIG AGLALTGRPT VDTTSVTSAY PYQNDTQLNA TGYVVPQRKA AVASKGQGRV EWLGVLEGTR VKKDEIIARL ESNDVQASLA QARAQVQVSR ANLGVAQAEL KDAEIALRRT STLAPKGAVP AAQLDIDTAR VNKARATLDS DQAAIASAEA NAQAAQVAVD QTVIRAPFDG IVLAKHANVG DNITPFSSAS DSKGAVVTIA DMETLEVEAD VAESNIAKIR AEQPCEIQLD ALPDLRFAGR VSRIVPTVDR SKATVLVKVR FVDRDERVLP DMSAKIAFLS KPASAQDRQP VTAVQASAVV ERDGRPVVFV VKDDAVHAVA VAKGARIGEL VAVRGVTPGD TVVLAPGAKL KDGANVTVAK K
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