Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2767 |
Symbol | rpoB |
ID | 4092466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 3032741 |
End bp | 3036847 |
Gene Length | 4107 bp |
Protein Length | 1368 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638016053 |
Product | DNA-directed RNA polymerase subunit beta |
Protein accession | YP_622638 |
Protein GI | 107024311 |
COG category | [K] Transcription |
COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATATT CCTTCACCGA GAAGAAGCGC ATTCGCAAGA GTTTCGCGAA GCGCCCCATC GTTCACCAAG TTCCGTTCTT GCTGGCTACC CAGCTTGAAT CATTCAGCAC GTTTCTGCAA GCCGATGTAC CCGCGACGCA ACGTAAGCCT GAGGGTTTGC AGGCCGCGTT CACGTCGGTA TTTCCCATTG TTTCGCACAA CGGTTTCGCG CGCCTCGAGT TCGTGAGCTA TGCGCTGTCC TCGCCGGCAT TCAACATCAA GGAATGCCAG CAGCGTGGCC TGACGTACTG CTCCGCGCTG CGCGCGAAGG TCCGCCTCGT CATTCTCGAC AAGGAATCGC CGAACAAGCC GGTCGTCAAG GAAGTGAAGG AGCAGGAAGT GTACATGGGC GAAATTCCGC TCATGACGCC GACGGGCTCG TTCGTCATCA ACGGCACCGA GCGTGTCATC GTCTCGCAGC TGCACCGTTC GCCGGGCGTG TTCTTCGAAC ACGACAAGGG CAAGACGCAC AGCTCGGGCA AGCTGCTGTT CTCGGCACGG ATCATTCCGT ACCGCGGCTC GTGGCTCGAC TTCGAATTCG ATCCGAAGGA CATCCTGTAC TTCCGCGTCG ACCGTCGCCG CAAGATGCCG GTCACGATCC TGCTGAAGGC CATCGGCCTG ACGCCGGAAC AGATCCTCGC GAACTTCTTC GTGTTCGACA ACTTCACGCT GATGGACGAA GGCGCGCAAC TCGAGTTCGT GCCCGAGCGC CTGCGTGGTG AAGTCGCGCG TTTCGACATC ACGGATCGCG ACGGCAAGGT CATCGTCCAG AAGGACAAGC GGATCAACGC GAAGCACATT CGTGACCTCG AAGCCGCGAA GACCAAGTTC ATCTCGGTGC CGGAAGACTA TCTGCTCGGC CGCGTGCTGG CGAAGAACGT CGTCGACGGC GATACCGGCG AAGTGATCGC GAGCGCGAAC GACGAAGTCA CGGAAAGCGT GCTCGAGAAG CTGCGCGAAG CGGGCATCAA GGACATCCAG ACGCTCTACA CGAACGATCT GGACCAGGGC CCGTACATCT CGTCGACGCT GCGTGTCGAC GAAACGACCG ACAAGACGGC CGCGCGCATC GCGATCTACC GCATGATGCG TCCGGGCGAG CCGCCGACCG AAGAAGCGGT CGAGGCCCTG TTCAATCGTC TGTTCTACAG CGAAGAAGCG TACGACCTGT CGAAGGTTGG CCGCATGAAG TTCAACCGCC GCGTCGGCCG TGACGAGATC GTCGGCCCGA TGACGCTGCA GGACGACGAC ATCCTCGCGA CGATCAAGAT CCTCGTCGAG TTGCGCAACG GCAAGGGCGA AGTGGACGAC ATCGACCACC TCGGCAACCG TCGCGTGCGT TGCGTCGGCG AACTGGCGGA AAACCAGTTC CGCGCCGGCC TCGTGCGTGT CGAGCGCGCG GTCAAGGAAC GCCTCGGCCA GGCCGAAAGC GAAAACCTGA TGCCGCACGA CCTGATCAAC TCGAAGCCGA TTTCGTCGGC GATCCGCGAG TTCTTCGGTT CGTCGCAGCT GTCGCAGTTC ATGGACCAGA CCAACCCGCT GTCGGAAATC ACGCACAAGC GCCGTGTGTC CGCACTGGGC CCGGGCGGTC TGACCCGCGA GCGCGCAGGC TTCGAAGTCC GCGACGTGCA CCCGACCCAC TACGGCCGCG TGTGCCCGAT CGAAACGCCG GAAGGTCCGA ACATCGGCCT GATCAACTCG CTCGCACTGT ACGCGCACCT GAACGAATAC GGCTTCCTCG AGACGCCGTA CCGCAAGGTC GTGGACAGCA AGGTGACCGA CCAGATCGAC TACCTGTCGG CGATCGAGGA AGGCCGCTAC ATGATCGCCC AGGCGAACGC CGCGATCGAC GAGAACGGCC AGCTGATCGA CGAACTCGTG TCGTCGCGCG AAGCCGGCGA AACGATGATG GTCACGCCGG ACCGGATCCA GTACATGGAC GTCGCGCCGT CGCAGATCGT GTCGGTGGCA GCCTCGCTGA TCCCGTTCCT CGAGCACGAT GACGCGAACC GTGCATTGAT GGGTTCGAAC ATGCAGCGTC AGGCCGTGCC GTGTCTGCGT CCGGAAAAGC CGGTCGTCGG GACGGGCATC GAGCGCACCT GCGCGGTCGA CTCGGGTACG ACGGTTCAGG CGTTCCGCGG CGGTGTGGTC GACTACGTCG ACGCAGGCCG TATCGTGATT CGCGTGAACG ACGACGAAGC GGTCGCGGGT GAAGTCGGTG TCGACATCTA CAACCTGATC AAGTACACGC GTTCGAACCA GAACACGAAC ATCAACCAGC GTCCGATCGT GAAGATGGGC GACAAGGTCT CGCGCGGCGA CGTGCTGGCC GACGGCGCCT CGACGGACCT GGGCGAGCTC GCGCTCGGCC AGAACATGCT GATCGCGTTC ATGCCGTGGA ACGGCTACAA CTTCGAGGAT TCGATCCTGA TCTCGGAGAA GGTGGTCGCG GACGATCGCT ACACGTCGAT CCACATCGAA GAGCTGAACG TCGTTGCACG CGACACGAAG CTCGGGCCGG AAGAAATCAC GCGCGACATC TCGAACCTGG CGGAAGTCCA GCTCGGCCGT CTCGACGAAT CGGGCATCGT GTACATCGGT GCTGAAGTCG AAGCAGGCGA CGTGCTGGTC GGCAAGGTCA CGCCGAAGGG CGAGACCCAG CTGACGCCGG AAGAAAAGCT GCTGCGCGCG ATCTTCGGCG AGAAGGCTTC GGACGTGAAG GACACGTCGC TGCGCGTGCC GTCGGGCATG AGCGGCACCG TGATCGACGT CCAGGTGTTC ACGCGTGAAG GCATCCAGCG CGACAAGCGT GCGCAACAGA TCATCGACGA CGAACTGAAG CGCTACCGTC TCGACCTGAA CGACCAGCTG CGCATCGTGG AAGGCGACGC GTTCCAGCGT CTCGCACGCA TGCTCGTGGG CAAGGTCGCG AACGGCGGTC CGAAGAAGCT CGCGAAGGGC ACGAAGATCG ACCAGGCTTA CCTGGAAGAC CTCGACCACT ACCACTGGTT CGACATCCGC CTCGCGGACG ACGAAGCAGC GGCGCAGCTC GAAGCGATCA AGAACTCGAT CGAAGAGAAG CGTCACCAGT TCGATCTCGC GTTCGAAGAG AAGCGCAAGA AGCTCACGCA AGGCGACGAA CTGCCGCCGG GCGTGCTGAA GATGGTCAAG GTGTACCTCG CGGTGAAGCG CCGTCTGCAG CCTGGCGACA AGATGGCAGG CCGTCACGGT AACAAGGGTG TCGTGTCGAA GATCGTTCCG ATCGAAGACA TGCCGTACAT GGCCGACGGC CGTCCGGCAG ACGTCGTGCT GAACCCGCTC GGCGTGCCGT CGCGGATGAA CGTGGGTCAG GTTCTGGAAG TGCACCTCGG CTGGGCCGCG AAGGGCCTCG GCTGGCGTAT CGGCGAAATG CTGCAGCGTC AGGCGAAGAT CGAGGAACTG CGCACGTTCC TGACGAAGAT CTACAACGAG TCGGGCCGCC AGGAAGATCT GGAAAGCTTC ACCGACGACG AGATCCTCGA ACTCGCGAAG AACCTGCGCG AAGGCGTGCC GTTCGCGACG CCGGTGTTCG ACGGTGCGAC CGAGGAAGAA ATGGGCAAGA TGCTCGACCT CGCGTTCCCG GACGACATCG CCGAACAGCT CGGCATGAAC CCGTCGAAGA ACCAGGTCCG TCTGTACGAC GGCCGCACGG GTGAAATGTT CGAACGTCGC GTGACGCTCG GCTACATGCA CTACCTGAAG CTGCACCACT TGGTCGACGA CAAGATGCAC GCGCGTTCGA CCGGCCCGTA CTCGCTCGTC ACGCAGCAGC CGCTGGGTGG TAAGGCGCAG TTCGGTGGCC AGCGTTTCGG TGAAATGGAA GTGTGGGCGC TCGAAGCGTA CGGCGCGTCC TACGTGCTGC AGGAAATGCT GACGGTGAAG TCGGACGACG TGACCGGCCG GACGAAGGTG TACGAAAACC TCGTCAAGGG CGATCACGTG ATCGATGCAG GCATGCCGGA ATCCTTCAAC GTGCTCGTGA AGGAAATCCG CTCGCTCGGT ATCGATATCG ATCTCGACCG CAATTAA
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Protein sequence | MQYSFTEKKR IRKSFAKRPI VHQVPFLLAT QLESFSTFLQ ADVPATQRKP EGLQAAFTSV FPIVSHNGFA RLEFVSYALS SPAFNIKECQ QRGLTYCSAL RAKVRLVILD KESPNKPVVK EVKEQEVYMG EIPLMTPTGS FVINGTERVI VSQLHRSPGV FFEHDKGKTH SSGKLLFSAR IIPYRGSWLD FEFDPKDILY FRVDRRRKMP VTILLKAIGL TPEQILANFF VFDNFTLMDE GAQLEFVPER LRGEVARFDI TDRDGKVIVQ KDKRINAKHI RDLEAAKTKF ISVPEDYLLG RVLAKNVVDG DTGEVIASAN DEVTESVLEK LREAGIKDIQ TLYTNDLDQG PYISSTLRVD ETTDKTAARI AIYRMMRPGE PPTEEAVEAL FNRLFYSEEA YDLSKVGRMK FNRRVGRDEI VGPMTLQDDD ILATIKILVE LRNGKGEVDD IDHLGNRRVR CVGELAENQF RAGLVRVERA VKERLGQAES ENLMPHDLIN SKPISSAIRE FFGSSQLSQF MDQTNPLSEI THKRRVSALG PGGLTRERAG FEVRDVHPTH YGRVCPIETP EGPNIGLINS LALYAHLNEY GFLETPYRKV VDSKVTDQID YLSAIEEGRY MIAQANAAID ENGQLIDELV SSREAGETMM VTPDRIQYMD VAPSQIVSVA ASLIPFLEHD DANRALMGSN MQRQAVPCLR PEKPVVGTGI ERTCAVDSGT TVQAFRGGVV DYVDAGRIVI RVNDDEAVAG EVGVDIYNLI KYTRSNQNTN INQRPIVKMG DKVSRGDVLA DGASTDLGEL ALGQNMLIAF MPWNGYNFED SILISEKVVA DDRYTSIHIE ELNVVARDTK LGPEEITRDI SNLAEVQLGR LDESGIVYIG AEVEAGDVLV GKVTPKGETQ LTPEEKLLRA IFGEKASDVK DTSLRVPSGM SGTVIDVQVF TREGIQRDKR AQQIIDDELK RYRLDLNDQL RIVEGDAFQR LARMLVGKVA NGGPKKLAKG TKIDQAYLED LDHYHWFDIR LADDEAAAQL EAIKNSIEEK RHQFDLAFEE KRKKLTQGDE LPPGVLKMVK VYLAVKRRLQ PGDKMAGRHG NKGVVSKIVP IEDMPYMADG RPADVVLNPL GVPSRMNVGQ VLEVHLGWAA KGLGWRIGEM LQRQAKIEEL RTFLTKIYNE SGRQEDLESF TDDEILELAK NLREGVPFAT PVFDGATEEE MGKMLDLAFP DDIAEQLGMN PSKNQVRLYD GRTGEMFERR VTLGYMHYLK LHHLVDDKMH ARSTGPYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAS YVLQEMLTVK SDDVTGRTKV YENLVKGDHV IDAGMPESFN VLVKEIRSLG IDIDLDRN
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