Gene Bcen_2758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2758 
SymbolrplD 
ID4092457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp3019597 
End bp3020217 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content60% 
IMG OID638016044 
Product50S ribosomal protein L4 
Protein accessionYP_622629 
Protein GI107024302 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000017353 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCA AGCTCCTGAA CGAAAATGGT CAGGAAGGTG CAGTGGTCAA CGCATCGGAC 
GTCGTGTTCG GTCGTGACTA CAACGAAGCG CTGATCCACC AGGTCGTCGT CGCTTACCAG 
GCGAATGCTC GCCAGGGTAA CCGCGCACAG AAGGACCGTG AGCAAGTCAA GCACACGACC 
AAGAAGCCGT GGCGCCAGAA GGGTACGGGC CGCGCTCGTG CCGGTATGTC GTCGAGCCCG 
CTGTGGCGTG GCGGTGGTCG TATCTTCCCG AATTCGCCGG AAGAAAACTT CTCGCACAAG 
GTCAACAAGA AGATGCATCG CGCAGGTCTC TGCTCGATCT TCTCGCAGCT GGCCCGTGAA 
GGCCGTCTGT CGGTCGTCGA GGACATCATC CTCGAAGCGC CGAAGACCAA GCTGCTGGCC 
GACAAATTCA AGACCATGGG TCTCGACTCC GTGCTGATCA TCACCGACAC GGTCGACGAG 
AACCTGTACC TGGCTTCGCG CAACCTGCCG CACGTGGCGA TTGTCGAGCC GCGCTACGCT 
GACCCGCTGT CGCTGATCTA CTTCAAGAAA GTGCTGGTCA CGAAGGCTGC GGTCGCCCAG 
ATCGAGGAGT TGCTGTCATG A
 
Protein sequence
MELKLLNENG QEGAVVNASD VVFGRDYNEA LIHQVVVAYQ ANARQGNRAQ KDREQVKHTT 
KKPWRQKGTG RARAGMSSSP LWRGGGRIFP NSPEENFSHK VNKKMHRAGL CSIFSQLARE 
GRLSVVEDII LEAPKTKLLA DKFKTMGLDS VLIITDTVDE NLYLASRNLP HVAIVEPRYA 
DPLSLIYFKK VLVTKAAVAQ IEELLS