| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2716 |
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| Symbol | |
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| ID | 4091468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | - |
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| Start bp | 2988455 |
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| End bp | 2989570 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638016002 |
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| Product | Type IV pilus secretin PilQ |
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| Protein accession | YP_622587 |
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| Protein GI | 107024260 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00921837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGGC GCGGCAACGT GATTTGGGTC ACACCGGCAG CCGAGCTGGC TGCGCGCGAA
CGCGAGCGCT TCGAAATGCA TGCGCGGGCC GCCGATCTGG AGCCGCTCGC GAGCCGTACG
TTCGTGCTGC ACTATCCCCG CGCGCAGGAC GTGCAACGGC TGCTGGCCGG CGCGACCGGC
CAGCGCCTGC TGTCGAAGCG CGGTGCTGCT GCGGCCGATC CCCGCACGAA CCTGCTGTTC
GTCACCGATC TCGCGCCGCG CATCACGCAG ATCGCGGGCC TGATCGATGC GATCGACCGG
CCGTCGCGGC AGGTCCGGAT CGAGGCCCGC ATCGTCGAAG GCGAGCAGGG TTTCTCGCGC
AACCTTGGCG CCCGCGTCGC GCTGCGTGCG CAGGGGCGGC CGCCAGCGGC CGAAGGCGCG
TCCTTCACGG CGAACGCACG CAACGCGCTC GACCTTGCCG CGCGGCCGCT CGGCGGCTTC
GACGCGGCGA CCGCCGGTTT CACGCTGTTC GCCGCGCCAC TCAGCCGCGT ACTCGACATC
GAACTGAGCG CGCTCGAGGC GCAGGGACGG GGCCAGATCG TTTCGCGTCC GCGGGTGGTG
ACGGCCGATC GCGTCAAGGC CATCGTCGAA CAGGGTTCCG AGCTGCCGTA CCAGGCGAAG
GTCGGCAACG GCATGAGCGG TGTGCAGTTC CGCCGCGCGA CGCTCAAGCT CGAAGTCGAG
CCGCAAATCA CGCCGGACGG GCGCGTGGTG CTCGATCTCG ACGTGACGAA GGACAGCGTC
GGCGAGCCGA CCGCGGCCGG CCCCGCCATC CATACGAAGC ATGTGCAAAC GCGCGTCGAG
GTCGAGAATG GCGGGACGGT CGCGATCGGC GGCATCTATG AACAACTGAA CCGGAACGAT
GTGACGCGGG TGCCACTCTT GGGCAAAATA CCGTTTCTGG GCGCGCTTTT CAGGCACCGC
GCGCAGCGCG ACCAGCGCAA CGAACTGGTC GTTTTCATCA CGCCGACCGT CGTCGATGCG
CGTTGCGGCG CACCCGGCGC GGGCGACGCG GATGCCGAGG AAACGGGGCC GGAAGCCGCC
GGCGCAGGCT CGACAAGGCA GCCGCTTTGC CAGTAA
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| Protein sequence | MSRRGNVIWV TPAAELAARE RERFEMHARA ADLEPLASRT FVLHYPRAQD VQRLLAGATG
QRLLSKRGAA AADPRTNLLF VTDLAPRITQ IAGLIDAIDR PSRQVRIEAR IVEGEQGFSR
NLGARVALRA QGRPPAAEGA SFTANARNAL DLAARPLGGF DAATAGFTLF AAPLSRVLDI
ELSALEAQGR GQIVSRPRVV TADRVKAIVE QGSELPYQAK VGNGMSGVQF RRATLKLEVE
PQITPDGRVV LDLDVTKDSV GEPTAAGPAI HTKHVQTRVE VENGGTVAIG GIYEQLNRND
VTRVPLLGKI PFLGALFRHR AQRDQRNELV VFITPTVVDA RCGAPGAGDA DAEETGPEAA
GAGSTRQPLC Q
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