| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2686 |
|---|
| Symbol | |
|---|
| ID | 4091592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 2954092 |
|---|
| End bp | 2954913 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638015972 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_622557 |
|---|
| Protein GI | 107024230 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.859674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAC ACTCCCCACG CGAACTGCGT TCGCTGACGT CCGAGGGGAC GGCCCGGCCC
GTGCCGGGCA GCGGGTTTCG CACGCTGTTC TACAAGGAAC TGCTGCGTTT CTGGAAGGTG
TCGTTCCAGA CGGTGCTCGC GCCGATCGTC ACGGCGTTGC TGTATCTGAC GATCTTCGGC
CACGCGCTGT CGGGCCGCGT CGAGGTGTAT CCGGGCGTCG AGTACGTGAG CTTTCTCGTG
CCGGGCCTCG TGATGATGAG CGTGCTGCAG AACGCGTTCG CGAACAGCTC GTCGTCGCTG
ATCCAGTCGA AGATCACCGG CAACCTCGTG TTCATGCTGC TGCCGCCGCT GTCGTACCGC
GACATCTTCG GCGCGTACGT GCTCGCGTCC GTCGTGCGGG GGCTCGCGGT CGGCACCGGC
GTGTTCGTCG TGACGATCTG GTTTATCCCG ATGCACTTCG CGGCGCCGCT GTTCATCATT
GCGTTCGCGC TGCTCGGCTC GGCGATCCTC GGCACGCTCG GCCTGATCGC CGGGATCTGG
GCCGAGAAGT TCGACCAGCT CGCCGCGTTC CAGAACTTCC TGATCATGCC GCTGACGTTC
CTGTCCGGCG TGTTCTATTC GACGCATTCG CTGCCGCCCG TGTGGCGCGA AGTGTCGCGT
CTCAACCCGT TTTTCTACAT GATCGACGGC TTCCGTTTCG GGTTCTTCGG CGCGTCCGAC
ATCAACCCGT TCGCGAGCCT CGCGATCGTC ACCGGTTTCT TCGTGCTGCT CGCGCTGATC
GCGATGCGGC TGCTCGCGAC CGGCTACAAA CTGCGTCATT GA
|
|---|
| Protein sequence | MNQHSPRELR SLTSEGTARP VPGSGFRTLF YKELLRFWKV SFQTVLAPIV TALLYLTIFG
HALSGRVEVY PGVEYVSFLV PGLVMMSVLQ NAFANSSSSL IQSKITGNLV FMLLPPLSYR
DIFGAYVLAS VVRGLAVGTG VFVVTIWFIP MHFAAPLFII AFALLGSAIL GTLGLIAGIW
AEKFDQLAAF QNFLIMPLTF LSGVFYSTHS LPPVWREVSR LNPFFYMIDG FRFGFFGASD
INPFASLAIV TGFFVLLALI AMRLLATGYK LRH
|
|---|
| |