| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2647 |
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| Symbol | |
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| ID | 4091532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | - |
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| Start bp | 2913671 |
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| End bp | 2916475 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638015932 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_622518 |
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| Protein GI | 107024191 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.217872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTCAAGA TCAGCGGCAA TCACATTTCG TTCGAGGATC TCAAAACCGT CGCGAGCGCG
GTGCCGATCA TCGGCAACCT GATGGCGTTC TACGATGCCG TGTGCGACAT CGTGACGATC
GTCGAGAAGC GTCATGCCGA TCTGCTCGAT TACCTTGGAC TCGCGATCAA CCTGATCGGG
GTCATTCCGG TTCCGCCGCC GCTGGCGTCG TTCCGACTGT CGGCGCGGCC GCTGTTGGCG
CTTGTGCGCA ATCAGTTGCT GGTGTCTCGC GGCAATCTCG GGGCGGCGAT CATTGGCGTG
CTCGTTGCAC ACGTCAACGC CGCGGCCGCG ACGGAAATCG AGAACTTCCT GAAGACGTTG
CAGGAAGTCC TTGTCGATCT GCTGAATGAC TGCGCGGCCA AGGCGCAGGA ATTGATGGTC
GGTATTGCCA GCGGACTCGA GCTTGCCCTC AAAGGGCAGA TTTTCGACAG TAGTGCGAAC
GTGCGACGTA CGCAGCAGAT CGCGCGGAAG ATGGGCGAGC GATCCTGGTA CAACCCGAAG
CTCTTGGTCG ATGCGTTCGA GTACGGTTAC GAAGGTTCGA TCGCGTTGGG CAAGGAAGCC
GGCAACGCGA CGGTCGGGAC CGCCGCGAAG CTGGCGCCGG ATTCGTGGCT CCAACCGTTT
CGCGATATCG TCGCCTTCCT GAAGACTGAG GCGCCGAAAG TTGCGAAGGC CATCCGTGAT
CTGAATGGCA GCGAAGAAGG CAAGATGCTC TGGCTGATCG CGCAAGTGAT CGAGGCCGTG
GCACGGGTGC GGGCGGGCGG CAAGCTTCGT GAAAAGACCG CCGACGTGCC GACCGGCGGC
AAGGGAAGGG CACATCATGA TCGCCCGCAG GAGCCGGTGG GTGCGGTCGA GCAGCATGCG
CATCCGGAGG GTCCTGGCCA GAGCCCCTGC AAAGGTTGCG GGGTCGGCGC GTCGACCGGG
TCGATCGATT TCGCTTTCGG CGATGAGACG TTCACGCATA CGGACTTTGA ACTGCCCGGC
GCATTGCCGC TTGTCTGGGC GCGTACTTAT CGCTCACGCC TGTCCGCATA CGACACCGGA
GAACTCGGCG CGCGATGGAT TACGCCGTAC ACGACGCGCA TCGATATAGA AGGCGACACA
TGGTTCTACC GTGATGCCAG CGGGCGCAGC ATTGAATATC GCGCGCTCGC AGCCGGAAGC
GTGCATGACG ATCTCTCGGA AAACCTGACG CTGTCGCGAC TCGACGATAC GTGGGTGACG
ATTGCGTACG GCCACGACGA GTTGCACGTG TATGAACGGC GTGGCAACGC GTTCAGGCTG
GCGATGCAGA AAGATCGCGC GGGTAACACG ATCACGCTCG ACTACGATGC GCGCGACCAC
GTGGCGCGCC TGATTGATGC GAACGGTAAC GTGCTGTCGT TCGAGCACGA CAAGCACGGC
CGGATCGTAC TGATCGAGCA GGTGCTCGAA GACGGTAAGC GTCGCACGCT CGCGAGCTAC
GCCTATGACG AAGCGGCCGA TCTGATCCGC GCAACCGATC GGCACGGCAA CGCGTGGAAC
TACCAGTACG ACCGACATCT CGTCACGCGC TACACCGATC GCACCGGCCG CGGGATGTCG
CTTGAATGGG ACGGCGCGGA CGCTGACGAC AACGCGAATG CGAAATGCGT GCGCGAGTAC
GCGGACGACG GCAGCCTCGA TATCCGTCTG GCGTGGCATC CGAACATTCG ATTGACCTAT
GTGACCGATG CGCTCGGTCA GACGACGCGT TATTACTTCA ATATCAAGGG CTACGTTTAT
CGGATCGCCT ATCCGGATGG AAGCGAAGAG TGGTTCCGGC GAGACGAGCA CAACAATCTG
ACGTTGCACA TTCTGCCGGA CGGCAGCGTC GAGCAGATGC GTTACGACGC GCGCGGTAAC
CGGACATGGC ACGAGCGCGC TGACGGCAGC ATTGTCGAGA TGGCATACGA CGACAAGGAC
CAGATGATCC GGCTCGTCGA TCCGAATGGG CATGTCTGGC AGCGCAAGTA CGATGATGCA
GGCAATCTCG TCGAGGAAAT CGATCCGCTC GAGCACTCGA CGAAGTACAG CTATAACGAC
AAGGGGCTGC CGACACAGAT CACCGATGCC AAAGGCGGAT CGAAGGCGCT CGAATACAAC
GCCGCCGGGC AATTGACCGG CTACACGGAC TGCTCTGGAA AGAAGACGGC GTGGCGCTAT
GACGATATCG GGCGTGCGAT CGAGACAAAG GATGCGTCCG GGGGCGTCGT TGCTTATGCA
TATGGCCCGA ACGGCCAGTT GACGGAGATT CGTTCGCCGG CCGGTGTCGA ACACGTGCAG
TACGATGCTG AAGGTCGATT GCTTGGGCGT ACGGATCAAC TCAATCGGTC GACGCGATAT
GGCTACGATG CCGTTGGCCG TATCGCGAGC CGCTCGGACG CGCTCGGGCA GACGATCGCG
TATCGCTACG ACCGTCTCGG GCGCTTGACC GCGCTGACCG ATGCCAACTT TGCGACGTAC
CAGTTCCGCT ACGATCCGGC AGGGCGGCTG ATCGAGGAAA TCGCCTTCGA CGGCAAGTCG
ACGCGTTATC AGTACGATCC GGACAGCGGC AGTCTCGTTT CGATCGATGA AGCGGGTTGC
GTGACTTCGG TCGACGTCGA TGCGAACGGC CGTCTGCTGA AGCGCATCGC GGGGGGACAG
CGAGGAACGG TTTGCCTACG ATCCGAGCGG CAGGTTGATC GACGCGGTGA ATCGGTACAG
CCGCGTGCAG TTCTTCTTCG ATCCGGTTGG CAATCTGGTG CGTGA
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| Protein sequence | MLKISGNHIS FEDLKTVASA VPIIGNLMAF YDAVCDIVTI VEKRHADLLD YLGLAINLIG
VIPVPPPLAS FRLSARPLLA LVRNQLLVSR GNLGAAIIGV LVAHVNAAAA TEIENFLKTL
QEVLVDLLND CAAKAQELMV GIASGLELAL KGQIFDSSAN VRRTQQIARK MGERSWYNPK
LLVDAFEYGY EGSIALGKEA GNATVGTAAK LAPDSWLQPF RDIVAFLKTE APKVAKAIRD
LNGSEEGKML WLIAQVIEAV ARVRAGGKLR EKTADVPTGG KGRAHHDRPQ EPVGAVEQHA
HPEGPGQSPC KGCGVGASTG SIDFAFGDET FTHTDFELPG ALPLVWARTY RSRLSAYDTG
ELGARWITPY TTRIDIEGDT WFYRDASGRS IEYRALAAGS VHDDLSENLT LSRLDDTWVT
IAYGHDELHV YERRGNAFRL AMQKDRAGNT ITLDYDARDH VARLIDANGN VLSFEHDKHG
RIVLIEQVLE DGKRRTLASY AYDEAADLIR ATDRHGNAWN YQYDRHLVTR YTDRTGRGMS
LEWDGADADD NANAKCVREY ADDGSLDIRL AWHPNIRLTY VTDALGQTTR YYFNIKGYVY
RIAYPDGSEE WFRRDEHNNL TLHILPDGSV EQMRYDARGN RTWHERADGS IVEMAYDDKD
QMIRLVDPNG HVWQRKYDDA GNLVEEIDPL EHSTKYSYND KGLPTQITDA KGGSKALEYN
AAGQLTGYTD CSGKKTAWRY DDIGRAIETK DASGGVVAYA YGPNGQLTEI RSPAGVEHVQ
YDAEGRLLGR TDQLNRSTRY GYDAVGRIAS RSDALGQTIA YRYDRLGRLT ALTDANFATY
QFRYDPAGRL IEEIAFDGKS TRYQYDPDSG SLVSIDEAGC VTSVDVDANG RLLKRIAGGQ
RGTVCLRSER QVDRRGESVQ PRAVLLRSGW QSGA
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