Gene Bcen_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2563 
Symbol 
ID4092564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2820667 
End bp2821869 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content69% 
IMG OID638015849 
Productbeta-ketoadipyl CoA thiolase 
Protein accessionYP_622435 
Protein GI107024108 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACG CCTACATCTG CGATGCGATT CGCACCCCCA TCGGCCGCTA CGGCGGCGCC 
CTGAAAGATG TTCGTGCCGA CGACCTCGGC GCAGTGCCGC TCAAGGCGCT GATCGAGCGC
AATCGCGACG TCGACTGGGC GGCGATCGAC GACGTGATCT ACGGCTGCGC GAATCAGGCC
GGCGAGGACA ACCGCAACGT CGCGCGCATG TCGGCGCTGC TGGCGGGCCT GCCTACTGCC
GTGCCGGGCA CGACGCTGAA CCGGCTGTGC GGTTCCGGGA TGGACGCGGT CGGCACGGCC
GCGCGCGCGA TCAAGGCAGG TGAAGCGCGC CTGATGATTG CAGGCGGCGT CGAGAGCATG
ACGCGCGCGC CGTTCGTGAT GGGCAAGGCC GCAAGCGCGT TCGCGCGCCA GGCCGACATC
TACGACACGA CGATCGGCTG GCGCTTCGTC AATCCGCTGA TGAAGCAGCT GTACGGTGTC
GATTCGATGC CGGAAACCGC CGAGAACGTC GCGGTCGACT ACGACATCAG CCGCGCGGAT
CAGGACCTGT TCGCGCTGCG CAGCCAGCAG AAGGCCGCGC GGGCGCAGCA GGACGGCACG
CTCGCTGAAG AAATCGTCGC GGTCACGATT CCGCAGAAGA AAGGCGATGC CATCGTTGTG
TCGCGCGACG AACATCCGCG CGAAACGTCG CTCGAAGCGC TCGCGAAACT GAAGGGCGTC
GTGCGCCCGG ACGGCTCGGT CACGGCCGGC AACGCGTCGG GCGTGAACGA CGGCGCCTGC
GCGCTGCTGC TCGCCAATGC GCAGGCTGCC GACCAGTATG GCCTGCGCCG CCGCGCGCGC
GTCGTCGGCA TGGCGACCGC CGGCGTCGAG CCGCGCGTGA TGGGCATCGG CCCCGCGCCG
GCCACGCAGA AACTGCTGCG CCAGCTCGAC ATGCGCATCG ACCAGTTCGA CGTGATCGAA
CTGAACGAGG CATTCGCGTC GCAAGGTCTC GCCGTGCTGC GCATGCTCGG CGTGGCCGAC
GATGATCCGC GCGTGAACCC GAATGGCGGT GCGATCGCGC TGGGCCACCC GCTCGGCGCA
TCGGGCGCGC GGCTCGTCAC CACGGCACTC CATCAACTCG AGCGTACCGG CGGCCGCTTC
GCGCTCTGTA CGATGTGCAT CGGCGTCGGC CAGGGCATCG CGATCGCGAT CGAACGCGTG
TAA
 
Protein sequence
MTDAYICDAI RTPIGRYGGA LKDVRADDLG AVPLKALIER NRDVDWAAID DVIYGCANQA 
GEDNRNVARM SALLAGLPTA VPGTTLNRLC GSGMDAVGTA ARAIKAGEAR LMIAGGVESM
TRAPFVMGKA ASAFARQADI YDTTIGWRFV NPLMKQLYGV DSMPETAENV AVDYDISRAD
QDLFALRSQQ KAARAQQDGT LAEEIVAVTI PQKKGDAIVV SRDEHPRETS LEALAKLKGV
VRPDGSVTAG NASGVNDGAC ALLLANAQAA DQYGLRRRAR VVGMATAGVE PRVMGIGPAP
ATQKLLRQLD MRIDQFDVIE LNEAFASQGL AVLRMLGVAD DDPRVNPNGG AIALGHPLGA
SGARLVTTAL HQLERTGGRF ALCTMCIGVG QGIAIAIERV