Gene Bcen_2538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2538 
Symbol 
ID4093049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2789372 
End bp2790331 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content72% 
IMG OID638015819 
ProductAlkA-like 
Protein accessionYP_622410 
Protein GI107024083 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000684088 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCATCG ACACGACAAC GATTACCTCC CTCGCGAACG GCGGCCCTGT GCCGCCGTCC 
GCGCAGATGG AGCTGCGCTA CAAGGCGCCG TACGACTGGG CGCGCGTGCT GCGCTTCTTC
AGCGGGCGCG CGATTCCGGG CGTCGAGCAG GTCGCGGACG GCGTGTATCG CCGCATTGTC
GATCTGCACG GCGATGCGGG CCGGCTCACC GTCACGAAAC ATCCGCGCAA GCATTGCCTG
ATCGCGACCG TCGAAGGGGC GGTCGCGCGT CACGTCGACG ATGCGTTCGC CGCACGCGTC
GCGACGATGT TCGACCTCGG CGCCGATCCG GCCGCGATCG GCGGCGACCT CGCGCGCGAT
CCGTGGTTCG CGCCGCTCGT CGAGGCCGCG CCGGGGCTGC GCGTGCCGGG TGCGTGGTCG
GGGTTCGAGC TGGCCGTGCG CGCGATCGTC GGCCAGCAGG TGAGCGTGAA GGCCGCGACG
ACGATCGTTG GCCGGCTCGT CGAACGGGCC GGCGAACGTG TGATTCATGA AGACGACGGC
GCGCCCGCGT GGCGGTTCCC GACGCCCGAC GCGCTGGCCG CGTGCGATCT CGACAAGATC
GGGATGCCCG GCAAGCGCGT GGCCGCGCTG ACCGGCGTGG CGCGCGCGGT GGCGGCCGGC
GACGTGCCGG TCGATCGTGC GCATGCCGAC CTCGCGATGC TGCGCAGCGC GTGGCTCGAG
CTGCCCGGCA TCGGCCCGTG GACGGTCGAA TACATCGCGA TGCGCGCATG GCGCGACCCG
GACGCGTGGC CGGCATCCGA TCTCGTGCTG ATGCAGTCGA TCGCCGCGCG CGACCCGGCG
CTCGACCGGC TCGCCAGCCA GAAGCACCGC ACCGAAGGCT GGCGGCCGTG GCGTGCGTAT
GCGGCGTTGC ATCTGTGGAA CGACGTGGCC GACCGGGCAG GCGGCGCGCG CGGCGGGTAA
 
Protein sequence
MSIDTTTITS LANGGPVPPS AQMELRYKAP YDWARVLRFF SGRAIPGVEQ VADGVYRRIV 
DLHGDAGRLT VTKHPRKHCL IATVEGAVAR HVDDAFAARV ATMFDLGADP AAIGGDLARD
PWFAPLVEAA PGLRVPGAWS GFELAVRAIV GQQVSVKAAT TIVGRLVERA GERVIHEDDG
APAWRFPTPD ALAACDLDKI GMPGKRVAAL TGVARAVAAG DVPVDRAHAD LAMLRSAWLE
LPGIGPWTVE YIAMRAWRDP DAWPASDLVL MQSIAARDPA LDRLASQKHR TEGWRPWRAY
AALHLWNDVA DRAGGARGG