| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2513 |
|---|
| Symbol | def |
|---|
| ID | 4093253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 2759590 |
|---|
| End bp | 2760093 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638015793 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_622385 |
|---|
| Protein GI | 107024058 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.449924 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGC TCAATATTCT TCATTACCCC GACAAGCGGC TGCACAAGGT CGCGAAGCCC
GTCGACAAGG TCGACGACCG GATCCGCAAG CTCGTCGCCG ACATGGCCGA GACCATGTAC
GCGGCGCCCG GCATCGGCCT GGCGGCCACG CAGGTCGACG TGCACGAGCG CGTGATCGTG
ATCGACGTCT CCGAAGAGAA GAACGAGCTG CGCGCGTTCA TCAACCCGGA GATCGTGTGG
TCGAGCGACG CGAAGCAGAC CTATGAAGAA GGCTGCCTGT CGGTGCCCGG CATCTACGAC
GAAGTCGAAC GCCCCGACCA CGTGCGCGTG CGTGCGCTCA ACGAGCAGGG CGAGACGTTC
GAGCTCGACT GCGAAGGCCT GCTCGCCGTG TGCGTCCAGC ACGAGATGGA TCACCTGATG
GGCCGCGTGT TCGTCGAATA TCTGTCGCCG CTCAAGCAGA CGCGCATCAA GACGAAGATG
AAGAAACTCG AACGCGCGAT GTAA
|
|---|
| Protein sequence | MALLNILHYP DKRLHKVAKP VDKVDDRIRK LVADMAETMY AAPGIGLAAT QVDVHERVIV
IDVSEEKNEL RAFINPEIVW SSDAKQTYEE GCLSVPGIYD EVERPDHVRV RALNEQGETF
ELDCEGLLAV CVQHEMDHLM GRVFVEYLSP LKQTRIKTKM KKLERAM
|
|---|
| |