Gene Bcen_2509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2509 
Symbol 
ID4093249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2755222 
End bp2756613 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content72% 
IMG OID638015789 
Productsun protein 
Protein accessionYP_622381 
Protein GI107024054 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.79792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAC CCCGTTCTTC CGCTTCGACT TCTTCCGGCC GCCCGGCGCG CCTGGCTGCG 
CTGCATCTGG CGCCCGATTC GCTCGGCTTC GCGCTCGACG CGGCCGCGCA GGCGGTCGAC
GCGGTGCGAC GCGGCACCGC GTTGCCGGCG GCGCTGTCGA CGGTATTCGC GCAGATGCCG
TCCGGTGCGC AGGCGCTCGC GCGCGGCGCG ACGCAGGACG TCGCCTACCG GACGATGCGT
CGCCTCGGCA GCGCGGACTG GCTGATCGGC AAGTTCGTCA GCAAGGCGCC GCCCGCGCAC
GTGCATGCGG TGCTCGCCGG CGCGTTCGCG CTGCTGCTCG ACCCGCCTGA CGAGGCCGCG
TACCCGGCGT TCACGGTGGT CGACCAGGCC GTCACCGTCA TCGGTGCGCG CCGCGAATTC
GCGTTCGCGA AGGGGATGGT CAACGCGGTG CTGCGCCGTT TCCTGCGCGA GCGCGACGCA
CTCGTCGCCG CGATGCAGGA CGAGCCGGTC GCGCGCTGGA ACTACCGCGC GTGGTGGGTT
GATGCGGTCA AGCGCGCATG GCCCGAGGCG TGGCAGGCGA TCCTCGCGGC CGGCGAGCGT
CAGGGGCCGC TGACGTTGCG CGTGAATGCG CGCCGCGCGA GCGTCGATGC GTATCTCGAC
ACGCTGCGCG CGAGCGGAAT CGACGCGACC GCGATCGGCC GGCATGCAGT GCGGCTCGCG
TCGGCGCTGC CGGTGGAACG CATTCCGGGC TTCGCCGACG GCGTGGTGTC GGTGCAGGAC
GCCGGCGCGC AACTCGCGGC CGAATGGCTC GACGCGCGCG ACGGCATGCG CGTGCTCGAC
GCGTGCGCGG CGCCCGGCGG CAAGACGGGC CATATTCTCG AACTCGCCGA TGCGGAAGTC
GTGGCGCTCG AAAGCGACGC GACGCGCGCG GCGCGCATCG GCGAGAATCT CGTGCGCCTG
TCGCTCGCGG CGAACGTGTG CGTCGGCGAC GCGGGCGCGT CGGGCACCTG GTACGACGGG
CGTCCGTTCG ATCGCATCCT GGCCGACGTG CCGTGCTCGG CGTCCGGCAT CGTGCGGCGG
CACCCCGACA TCCGCTGGCT GCGCCGCGAG GCCGACATCC CGGCGCTGGT CGCGGAGCAG
CGTCGCATCC TGTCGGCGCT GTGGCCGCTC GTGAAGCCGG GCGGCGAACT GCTTTACGTG
ACCTGTTCGA TCTTCCCCGA GGAAGGCGAA TTGCAGGCCC GCTGGTTTGA AGCGGCCTGT
GAAGATGCGG TACGATTGGA CGCCCCCGGC CAACTGCTGC CGGGCAGCGT GCAGGGACGG
GCGGCCGCCG GCGCACTCGA CCAGAACACC GATCACGACG GATTTTTCTA CGCGCGGTTT
CAGAAACGGT GA
 
Protein sequence
MTQPRSSAST SSGRPARLAA LHLAPDSLGF ALDAAAQAVD AVRRGTALPA ALSTVFAQMP 
SGAQALARGA TQDVAYRTMR RLGSADWLIG KFVSKAPPAH VHAVLAGAFA LLLDPPDEAA
YPAFTVVDQA VTVIGARREF AFAKGMVNAV LRRFLRERDA LVAAMQDEPV ARWNYRAWWV
DAVKRAWPEA WQAILAAGER QGPLTLRVNA RRASVDAYLD TLRASGIDAT AIGRHAVRLA
SALPVERIPG FADGVVSVQD AGAQLAAEWL DARDGMRVLD ACAAPGGKTG HILELADAEV
VALESDATRA ARIGENLVRL SLAANVCVGD AGASGTWYDG RPFDRILADV PCSASGIVRR
HPDIRWLRRE ADIPALVAEQ RRILSALWPL VKPGGELLYV TCSIFPEEGE LQARWFEAAC
EDAVRLDAPG QLLPGSVQGR AAAGALDQNT DHDGFFYARF QKR