Gene Bcen_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2477 
Symbol 
ID4093689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp2721580 
End bp2722116 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content67% 
IMG OID638015756 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_622349 
Protein GI107024022 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0567324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAAT TTCACGGCAC GACCATCGTT TCGGTCCGGC GCGGCGACAA GGTCGCGCTC 
GGCGGCGACG GCCAGGTAAC CCTCGGCAAC ATCGTCATGA AGGGTGGCGC GCGGAAAGTG 
CGGCGGATCT ACAACAACCA GGTGCTGGTC GGATTCGCGG GCGGCACCGC CGATGCGTTC 
TCGCTCCTCG ACCGCTTCGA GGCGAAGCTC GAGAAGCACC AGGGCAACCT GACCCGCGCG 
GCCGTCGAGC TCGCGAAGGA CTGGCGCACC GACCGGATGC TGCGCCGCCT CGAGGCGATG 
CTGATCACGG CCGATGCCAC CACCACGCTC GTCATCACCG GCAACGGCGA CGTGCTCGAT 
CCCGAAGGCG GCATCTGCGC GATCGGCTCG GGCGGCGCGT ACGCGCAGGC CGCGGCCCGC 
GCGCTCGTCG AGAACACCGA CCTGTCGCCG CGCGACATCG TCGAGAAGTC GCTCGGGATC 
GCGGGCGACA TGTGCATCTA CACGAACCAC AACCGCATCA TCGAAACGAT CGAGTAA
 
Protein sequence
MEQFHGTTIV SVRRGDKVAL GGDGQVTLGN IVMKGGARKV RRIYNNQVLV GFAGGTADAF 
SLLDRFEAKL EKHQGNLTRA AVELAKDWRT DRMLRRLEAM LITADATTTL VITGNGDVLD 
PEGGICAIGS GGAYAQAAAR ALVENTDLSP RDIVEKSLGI AGDMCIYTNH NRIIETIE