Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2456 |
Symbol | |
ID | 4093668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 2701198 |
End bp | 2702838 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638015735 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_622328 |
Protein GI | 107024001 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.101134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATACG ACTACATCAT CGTCGGCGGC GGTTCGGGCG GCTCGAGCCT GGCCGGCCGT CTCGCCGATG CCTGCCCCGA TGCGACGATC GCGCTGATCG AGGCCGGCTC GCATACGGAG CGCAACCTGC TCGTCAACAT GCCGGTCGGC ATCGCGGCGC TGGTGCCGTA CAAGCTCGGC ACCAACTACG GCTACGAGAC GGTGCCGCAG CCGGGCCTGG GCGGCCGGCG CGGTTACCAG CCGCGCGGGC GCGGGATGGG CGGATCGAGC GCGATCAACG CGATGATCTA TACGCGCGGC CACCCGGGCG ATTACGACGA GTGGGCGCAG CTCGGCGCGA CGGGCTGGGG CTGGCAGGAG GTGCTGCCGT ATTTCCGCCG CGCGGAAGGC AACGAGCGCG GCGCGGATGA ATGGCACGGC GCGGACGGCC CGTTGACCGT TTCCGATCTG CGCTTTCGCA ATCCGTTCTC CGAACGATTC ATCCAGGCCG CGCATGCCGC CGGCTATCCG CTGAACGACG ACTTCAACGG CGCGACGCAG GAAGGCGTCG GTTTCTATCA GGTCACGCAT CGCGACGGGT CGCGCTGCAG CGTGGCGCGC GCGTATATCT ACGGTCGCAA CCGGCCGAAC CTGCACGTGA TCACCGACGC GACGGTGCTG CGCGTGGGCT TCGACGGCAA GCGCGCGGTC GGCGTCGTGG TGTCGCGCAA CGGGCGGGTC GAGACGTTCG GCGCGCGCGC GGAAGTGGTC CTGTCGGCCG GCGCGTTCAA TTCGCCGCAA CTGCTGATGT GTTCGGGGAT CGGCCCGGCC GAGCAATTGC GCCGCCACGG GATCGCGGTC GTGCAGGATG CGCCGGACGT CGGCACGAAC CTGATCGACC ACATCGACTT CATCATCAAC ACGCGCGTGA ATTCGTCGGA GCTGGTCGGC GTGTGCCTGC GCGGCATCGC GAAGATGACG CCGGCGCTCG CGCGCTATTT CTCGAGCCGC ACCGGGATGA TGACGAGCAA CGTCGCGGAG GCCGGCGGCT TCATCAAGAG CGATCCGTCG CTCGAGCGTC CCGACTTGCA GCTGCATTTC TGCACGGCGC TCGTCGACGA CCACAACCGC AAGATGCACT GGGGCTTCGG TTATTCGCTG CACGTGTGCG CGCTGCGGCC GTTCAGCCGC GGCACGGTCG CGCTCGCGAG CGGCGATGCG CGCGACGCGC CGCTGATCGA TCCGCGCTTC TTCAGCGATT CACGCGACCT CGACCTGCTG GTGCGCGGCA CGCAGGCGAT GCGCCGCATC CTGTCCCAGG CGCCGCTCGC ATCGCAGGGC GGGCGCGAGC TGTACACGCG GCCGGACCAG AGCGAAGCGG AGCTGCGCGC GACGATCGTC GCGCATGCGG ACACGATCTA TCACCCGGTC GGCACCTGCC GGATGGGCTC GGATGCGCGC GCGGTCGTCG ATCCGCAACT GCGCGTGCGC GGCGTCGACG GGCTGCGCGT GGTGGATGCG TCGGTGATGC CGACGCTGGT CGGCGGGAAC ACGAATGCGC CGTCGGTGAT GATCGGCGAA CGCGCGGCGG ACTTCATCGT CGCCACGCGC AAGGGTGGCG TGCCGCGCGG CGAGGCTGCG GCTGCGGTGC ACGGCCGCTA G
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Protein sequence | MQYDYIIVGG GSGGSSLAGR LADACPDATI ALIEAGSHTE RNLLVNMPVG IAALVPYKLG TNYGYETVPQ PGLGGRRGYQ PRGRGMGGSS AINAMIYTRG HPGDYDEWAQ LGATGWGWQE VLPYFRRAEG NERGADEWHG ADGPLTVSDL RFRNPFSERF IQAAHAAGYP LNDDFNGATQ EGVGFYQVTH RDGSRCSVAR AYIYGRNRPN LHVITDATVL RVGFDGKRAV GVVVSRNGRV ETFGARAEVV LSAGAFNSPQ LLMCSGIGPA EQLRRHGIAV VQDAPDVGTN LIDHIDFIIN TRVNSSELVG VCLRGIAKMT PALARYFSSR TGMMTSNVAE AGGFIKSDPS LERPDLQLHF CTALVDDHNR KMHWGFGYSL HVCALRPFSR GTVALASGDA RDAPLIDPRF FSDSRDLDLL VRGTQAMRRI LSQAPLASQG GRELYTRPDQ SEAELRATIV AHADTIYHPV GTCRMGSDAR AVVDPQLRVR GVDGLRVVDA SVMPTLVGGN TNAPSVMIGE RAADFIVATR KGGVPRGEAA AAVHGR
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