Gene Bcen_2427 details

Gene Information

• Locus tag: Bcen_2427
• Symbol: dppF
• ID: 4091377
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008060
• Strand: -
• Start bp: 2671326
• End bp: 2672342
• Gene Length: 1017 bp
• Protein Length: 338 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 638015706
• Product: dipeptide transporter ATP-binding subunit
• Protein accession: YP_622299
• Protein GI: 107023972
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4608] ABC-type oligopeptide transport system, ATPase component
• TIGRFAM ID: [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGCAG TCAATGAAAC GCCTCGCGCT TCGCACGACG AGGAAGCGGT ACTGGTGGCC 
GACGGCCTCG CGAAGCACTA TTCGGTGAAG CGCGGGATGT TCGGGCAGGG CACGGTGAAG 
GCGCTGAACG GCGTGTCGTT CTCGCTGAAG CGCGGCAAGA CGCTCGCCGT CGTCGGCGAG 
TCGGGCTGCG GGAAATCGAC GCTCGCGCGC CAGCTCACGA TGATCGAGAC GCCCACCGCG 
GGCAGCCTGA CGATCGACGG CAAGAACGTG GCCGGCGCGA GCCGCGACAC GGTCGCCGAC 
CTGCGCCGCC GCGTGCAGAT GGTGTTCCAG AATCCGTTCG CGTCGCTCAA CCCGCGCAAG 
ACCGTCGAGC AGACGCTTTC CGAGCCGCTC GAGATCAACG CGAACCTGAC GGCCGCCGAG 
CGCGCCGCGC GCATCGCGCA GATCATGCGC ACGGTCGGCC TGCGCCCCGA GCACGCGAAG 
CGCTATCCGC ACATGTTCTC GGGCGGCCAG CGCCAGCGGG TCGCGATCGC GCGCGCGATG 
ATTCTCGATC CGCGCATCGT CGTCGCGGAC GAGCCGGTGT CCGCGCTCGA CGTGTCGATC 
CAGGCGCAGA TCCTGAACCT GTTCATGGAT CTGCAGGAGC AGTTCAAGAC GAGCTACGTG 
TTCATCTCGC ACAACCTGTC GGTGGTCGAA CACGTTGCCG ACGACGTGAT GGTGATGTAC 
TTCGGCAGCG TCGCCGAGCT CGGCGACAAG GCGACGATCT ACGCACGGCC GCGCCATCCG 
TACACGCGGG CGCTGATGTC GGCGACGCCG GCGATCTTCG AGGAAGATCG CCGCGTGCAG 
ATCAAGCTGC AGGGCGAACT GCCGTCGCCG CTCAATCCGC CGTCGGGCTG CGCGTTCCAC 
CAGCGCTGCC CGTACGCGGT CGAGCGGTGC CGCGTCGAGG AGCCGCAATT GCGCGAAGTG 
GACGGCCGGC GTGTAGCCTG CCATCGCGCC GAGGAGGTCG GGGAGGAGAA TGCCTGA 

 

Protein sequence

MNAVNETPRA SHDEEAVLVA DGLAKHYSVK RGMFGQGTVK ALNGVSFSLK RGKTLAVVGE 
SGCGKSTLAR QLTMIETPTA GSLTIDGKNV AGASRDTVAD LRRRVQMVFQ NPFASLNPRK 
TVEQTLSEPL EINANLTAAE RAARIAQIMR TVGLRPEHAK RYPHMFSGGQ RQRVAIARAM 
ILDPRIVVAD EPVSALDVSI QAQILNLFMD LQEQFKTSYV FISHNLSVVE HVADDVMVMY 
FGSVAELGDK ATIYARPRHP YTRALMSATP AIFEEDRRVQ IKLQGELPSP LNPPSGCAFH 
QRCPYAVERC RVEEPQLREV DGRRVACHRA EEVGEENA