Gene Bcen_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2416 
Symbol 
ID4091366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2659984 
End bp2660763 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content69% 
IMG OID638015695 
ProductXRE family transcriptional regulator 
Protein accessionYP_622288 
Protein GI107023961 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCAG ACCTCATGCG TATCGGCCAG CGCATTCGCC GCCTGCGCCG GGAAGCGAAG 
AAGACGCTGC TGGAAGTGGC GACCGAAGCG AACCTGTCGG TCGGGTTCCT GTCGCAGGTC
GAGCGCCATC TGACGGGCAT CTCGCTGTCG TCGCTCGTCA ACGTCGCGAA GGCGCTGGGG
GTGCCGCTCG GCACGCTGAT CGAGCAGCCG CGCCAGGCGC AGCCCGATTC GCACGAGGGC
AGCCGCAAGC CGTACGCGCT CGACGCCGCG TCGCAGTGGT ACGAGCGGCT GTCCACCACG
TTCGACGGCA GCCAGATCAA CGCGCTGAAG GTGCAGATGA TGGAAGGCTA CCGGTCGGAA
TGGGTCGCGC ACGGCGGCGA CGAATTCGTG TACGTGCTGG CGGGCCGCGT CTGCTACACG
GTCGGCAAGA AGAATTACCC GCTGACGCCC GGCGACTCGC TGCACTTCGA CGCGCGCAAG
CGGCATCGCG TGGCCAATGT CGGCGACGGG CCGGCCGAGC TGATCACCGT CAGCACGCTG
CCGCTGTTCG ACGACAGTGA TGCGGAATTC GTATCCGCGA CGACGGAAAT CAGGCAGTCG
AAGCCCGGCG AGCCGCGCGT GAGCCGGCGC GCGCCGGCGT CCAAGCGGGA TGACCGCGAC
GCCGCCGCGG CACGGCCGTC CAGGGCAGGC GCTGCCGAAA AGAAGGGGGC GGCGAAGCCG
CGCGCCGCCG CCGGCAAACG CCCGGCGGCC GCGACTCCGG CGCGCAAGAA GAAACCGTAA
 
Protein sequence
MDSDLMRIGQ RIRRLRREAK KTLLEVATEA NLSVGFLSQV ERHLTGISLS SLVNVAKALG 
VPLGTLIEQP RQAQPDSHEG SRKPYALDAA SQWYERLSTT FDGSQINALK VQMMEGYRSE
WVAHGGDEFV YVLAGRVCYT VGKKNYPLTP GDSLHFDARK RHRVANVGDG PAELITVSTL
PLFDDSDAEF VSATTEIRQS KPGEPRVSRR APASKRDDRD AAAARPSRAG AAEKKGAAKP
RAAAGKRPAA ATPARKKKP