| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2416 |
|---|
| Symbol | |
|---|
| ID | 4091366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 2659984 |
|---|
| End bp | 2660763 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638015695 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_622288 |
|---|
| Protein GI | 107023961 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCAG ACCTCATGCG TATCGGCCAG CGCATTCGCC GCCTGCGCCG GGAAGCGAAG
AAGACGCTGC TGGAAGTGGC GACCGAAGCG AACCTGTCGG TCGGGTTCCT GTCGCAGGTC
GAGCGCCATC TGACGGGCAT CTCGCTGTCG TCGCTCGTCA ACGTCGCGAA GGCGCTGGGG
GTGCCGCTCG GCACGCTGAT CGAGCAGCCG CGCCAGGCGC AGCCCGATTC GCACGAGGGC
AGCCGCAAGC CGTACGCGCT CGACGCCGCG TCGCAGTGGT ACGAGCGGCT GTCCACCACG
TTCGACGGCA GCCAGATCAA CGCGCTGAAG GTGCAGATGA TGGAAGGCTA CCGGTCGGAA
TGGGTCGCGC ACGGCGGCGA CGAATTCGTG TACGTGCTGG CGGGCCGCGT CTGCTACACG
GTCGGCAAGA AGAATTACCC GCTGACGCCC GGCGACTCGC TGCACTTCGA CGCGCGCAAG
CGGCATCGCG TGGCCAATGT CGGCGACGGG CCGGCCGAGC TGATCACCGT CAGCACGCTG
CCGCTGTTCG ACGACAGTGA TGCGGAATTC GTATCCGCGA CGACGGAAAT CAGGCAGTCG
AAGCCCGGCG AGCCGCGCGT GAGCCGGCGC GCGCCGGCGT CCAAGCGGGA TGACCGCGAC
GCCGCCGCGG CACGGCCGTC CAGGGCAGGC GCTGCCGAAA AGAAGGGGGC GGCGAAGCCG
CGCGCCGCCG CCGGCAAACG CCCGGCGGCC GCGACTCCGG CGCGCAAGAA GAAACCGTAA
|
|---|
| Protein sequence | MDSDLMRIGQ RIRRLRREAK KTLLEVATEA NLSVGFLSQV ERHLTGISLS SLVNVAKALG
VPLGTLIEQP RQAQPDSHEG SRKPYALDAA SQWYERLSTT FDGSQINALK VQMMEGYRSE
WVAHGGDEFV YVLAGRVCYT VGKKNYPLTP GDSLHFDARK RHRVANVGDG PAELITVSTL
PLFDDSDAEF VSATTEIRQS KPGEPRVSRR APASKRDDRD AAAARPSRAG AAEKKGAAKP
RAAAGKRPAA ATPARKKKP
|
|---|
| |