Gene Bcen_2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2385 
Symbol 
ID4092971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2627294 
End bp2628133 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content65% 
IMG OID638015665 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_622258 
Protein GI107023931 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAGC CGAGCAAACC GCTGTCGACG GGCGTTCTCG CCTTCGGCTT CCTGTTCCTG 
TACATCCCGA TCATCAGCCT CGTCGTGTAC TCGTTCAACG AGTCGAAGCT GGTCACGGTG
TGGTCGGGCT TCTCGCTGAA GTGGTACGCG GCGCTGCTGG ACGACGACGA GCTGCTGACC
GCCGCGTGGC TGTCGCTGAA GATCGGCCTG CTGACGGCCA CCGCGTCGGT CGTGATCGGC
ACGTGGGCCG GCTTCGTGCT CGCGCGCTTC GGCCGCTTCA AGGGCTTCAC GCTGTACACG
GGGATGATCA ACGCGCCGCT GGTGATTCCG GAGGTGATCC AGGGGATCTC GCTGCTGCTG
CTGTTCGTCG CGCTCGAGCA GATGTTCGGC TGGCCGAAGG GCCGCGGGAT GCTGACGATC
TGGATCGGCC ACGTGATGCT GTGCGTGTCG TACGTGGCGA TCATCGTGCA GTCGCGCGTG
AAGGAGATGA ACAAGTCGCT CGAGGAAGCC GCGCTCGACC TCGGCGCCAC GCCGCTGAAG
GTGTTCTTCG TGGTGACGCT GCCGCTGATC TCGCAGGCGT TGCTGTCGGG GTGGCTGCTG
TCGTTCACGC TGTCGATCGA CGATCTGGTG CTGTCGGCGT TCCTGTCCGG GCCGGGGTCG
ACGACGCTGC CGCTGGTGGT GTTCTCGCGC GTGCGGCTGG GGCTGAACCC GGAGATGAAT
GCACTGGCGA CGCTGTTCAT CACGGCCGTG ACGATCGGCG TGATCGTCGT GAACCGGATG
ATGATTGCGC GCGAGCGTCG CCGGATGGCC GACTTGAAGG CCGCGTTCGC GGCGGCTTGA
 
Protein sequence
MIKPSKPLST GVLAFGFLFL YIPIISLVVY SFNESKLVTV WSGFSLKWYA ALLDDDELLT 
AAWLSLKIGL LTATASVVIG TWAGFVLARF GRFKGFTLYT GMINAPLVIP EVIQGISLLL
LFVALEQMFG WPKGRGMLTI WIGHVMLCVS YVAIIVQSRV KEMNKSLEEA ALDLGATPLK
VFFVVTLPLI SQALLSGWLL SFTLSIDDLV LSAFLSGPGS TTLPLVVFSR VRLGLNPEMN
ALATLFITAV TIGVIVVNRM MIARERRRMA DLKAAFAAA