Gene Bcen_2314 details

Gene Information

• Locus tag: Bcen_2314
• ID: 4092540
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008060
• Strand: +
• Start bp: 2553840
• End bp: 2554517
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638015595
• Product: short chain dehydrogenase
• Protein accession: YP_622188
• Protein GI: 107023861
• COG category: [R] General function prediction only
• COG ID: [COG0300] Short-chain dehydrogenases of various substrate specificities

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACCG TATTGATCGT CGGCGCATCG CGCGGCCTCG GCCGCGAATT CGTCCGGCAA 
TACCGGCGCG ACGGCTGGAA CGTGATCGCC ACCGCACGCG ACGCGGCATC GCTCGACGCG 
CTGCGCGCGC TCGGCGCGCA GCCGCATGCG CTCGACATCG CGCGGCCCGA GCAGATCGCG 
GCGCTCGGCT GGAAGCTCGA CGGCGAACGG CTCGATGCGG CCGTGCTGGT GTCGGGCGTG 
TACGGGCCGC GCACCGAAGG CGTCGAGACG ATCACCGCCG AGGATTTCGA CGCGGTGATG 
CATACCAACG TGCGCGGGCC GATGCAGTTG CTGCCGATCC TGCTGCCGCT CGTCGAGGAC 
GCCCGCGGCG TGCTGGCCGT CGTGTCGAGC CGGATGGGCA GCATCGCCGA GGCGACCGGC 
ACGACCGGCT GGCTGTACCG CGCGAGCAAG GCCGCGCTGA ACGACGCGCT GCGCATCGCG 
TCGCTGCAGA CGCGCCATGC CGCATGCATT TCGCTGCATC CCGGCTGGGT GCGCACCGAC 
ATGGGCGGCG CGCAGGCCGC GATCGATCCG GAAACGAGCG TGACCGGCAT GCGTCGCGTG 
ATCGCCGAAT CCGCTTCGGA CGTGTCCCAG GCGAACGGCC GGTTCTTCCA GTACGACGGC 
GTCGAGCTGA GCTGGTGA 

 

Protein sequence

MKTVLIVGAS RGLGREFVRQ YRRDGWNVIA TARDAASLDA LRALGAQPHA LDIARPEQIA 
ALGWKLDGER LDAAVLVSGV YGPRTEGVET ITAEDFDAVM HTNVRGPMQL LPILLPLVED 
ARGVLAVVSS RMGSIAEATG TTGWLYRASK AALNDALRIA SLQTRHAACI SLHPGWVRTD 
MGGAQAAIDP ETSVTGMRRV IAESASDVSQ ANGRFFQYDG VELSW