Gene Bcen_2277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2277 
Symbol 
ID4093019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp2512015 
End bp2512941 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content66% 
IMG OID638015558 
Productaminotransferase, class IV 
Protein accessionYP_622151 
Protein GI107023824 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01121] D-amino acid aminotransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAG CCGAATTCGA ACCGATCGTC TACCTCAGCG TCTCGGCGCA GGAGGAACTG 
GTGCCGCTGT CCGAAGCCCG TGTACCGGTG CTCGACCGCG GGTTCATCTT CGGCGACGGC 
GTGTATGAAG TCGTGCCCGT CTATGCGCAC GACGGCGCGC ACGTGCCGTT CCGGATCGAA 
CAGCATCTAG ACCGGCTCGC GCGCAGCCTG AAGAAGATCG GCATCGACAA CCCGCACGAT 
GCGGCGGGCT GGCGCGCGCT GATCGAGCGG GTGGTCGCGG CGAATGCCGA AGGCCTCGGC 
GACGGCAACG CGCTCGTCTA CCTGCAGGTG ACGCGCGGCG TCGCGAAGCG CGGCCACGCG 
TTCCCGGCGA ACGCGGTGCC GACCGTGTTC GCGATGACGA GCCCGCTGCG CCTGCCGTCG 
GAAGCGGAGC GCGCGAAGGG CGTGCGCTGC GTGACGGCCG AGGATCGCCG CTGGCTGCAT 
TGCGACATCA AGTCGATCTC GCTGCTCGGC AACGTGTTGA TGGCGCAGCA TGCGGCCGAA 
CGCGACGCGT TCGAGACGAT CCAGCTGCGC GATGACAACG TGACCGAAGG CTCGTCGTCG 
AACGTGTGGA TCGTGAAGAA TGGCGAACTG TTCGCACCGC CGCGCAGCAA CAAGATCCTC 
GAAGGGATCC GCTACGCGCT GGTCGAGCAG CTGGCCGAAG AGTGCGGGAT CCGGTTCGTC 
GCGCGCGAGA TCAGCGAGGT CGAGCTGCGC TCGGCCGACG AGATCATGCT GACGTCGGCC 
ACCAAGGAAA TCCTGCCTGT GACGTCGCTC GACGATCTGC CCGTGCAGGG CGGCAAGCCG 
GGCCCCGTGT TCGCGGCGCT GTATGACGCG TACCAGCGTG CGAAGGCACG CGAATTTGAA 
CAGTTTGACC TGACCCGGAG AAAATGA
 
Protein sequence
MSQAEFEPIV YLSVSAQEEL VPLSEARVPV LDRGFIFGDG VYEVVPVYAH DGAHVPFRIE 
QHLDRLARSL KKIGIDNPHD AAGWRALIER VVAANAEGLG DGNALVYLQV TRGVAKRGHA 
FPANAVPTVF AMTSPLRLPS EAERAKGVRC VTAEDRRWLH CDIKSISLLG NVLMAQHAAE 
RDAFETIQLR DDNVTEGSSS NVWIVKNGEL FAPPRSNKIL EGIRYALVEQ LAEECGIRFV 
AREISEVELR SADEIMLTSA TKEILPVTSL DDLPVQGGKP GPVFAALYDA YQRAKAREFE 
QFDLTRRK