Gene Bcen_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2224 
Symbol 
ID4093631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2456345 
End bp2457247 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID638015505 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_622098 
Protein GI107023771 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) 
TIGRFAM ID[TIGR01473] protoheme IX farnesyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGCA CCCTCTCCCA ATCGCCCGGT AGCCGCTTTT CCCAGTACAT GGCGCTGACG 
AAGCCGCGTG TCACGCAGCT CGCGGTGTTC TGCGCGGTGA TCGGCATGTT CCTCGCGACG
CCGGGCATGG TGCCGTGGCA TGTGCTGATC GGCGGCACCG TCGGCATCTG GTTGCTGGCC
GGCGCCGCGT TCGCGATCAA CTGCCTCGTC GAACAGAAGA TCGACGCGAT GATGCGCCGC
ACCGCGTGGC GTCCGTCCGC GCGCGGCGAG ATCACGACGC CGCAGATCCT GCTGTTCTCG
GCCGTGCTCG GCAGCGTCGG CGCATGGACG CTCTATACGT TCACGAACCC GCTGACGATG
TGGCTGACGA TCGCGACGTT CGTCGGCTAC GCGGTGATCT ACACGCTGCT GCTCAAGCCG
ATGACGCCGC AGAACATCGT GATCGGCGGC GCGTCGGGCG CGATGCCGCC GGCGCTCGGC
TGGGCCGCCG TCACCGGCGC GGTGCCGGGC GACGCGTGGA TCCTCGTGCT GATCATCTTC
GTCTGGACGC CGCCGCATTT CTGGGTGCTC GCGCTGTATC GCCGCAAGGA TTACGAGAAC
GCCGGCCTGC CGATGCTGCC CGTCACGCAC GGCGAGAAGT TCACGCGGCT GCACATCCTG
CTGTACACGG TGATCCTGTT CGCGGTCACG CTGATGCCGT TCATTTCCGG GATGAGCGGG
GCCGTCTACC TGACGAGCGC GGTGCTGCTC GGCGCGGTGT TTCTCGCGTA TGCGTGGAAG
ATCCATCGCG ACTATTCGGA CGAACTCGCC CGCAAGGCCT TCCGCTATTC GATCGTCTAT
CTGTCGCTGC TGTTTGCCGC GCTGCTCGTC GATCACTATG CACGCCCGCT GCTCGGCGTG
TAA
 
Protein sequence
MQSTLSQSPG SRFSQYMALT KPRVTQLAVF CAVIGMFLAT PGMVPWHVLI GGTVGIWLLA 
GAAFAINCLV EQKIDAMMRR TAWRPSARGE ITTPQILLFS AVLGSVGAWT LYTFTNPLTM
WLTIATFVGY AVIYTLLLKP MTPQNIVIGG ASGAMPPALG WAAVTGAVPG DAWILVLIIF
VWTPPHFWVL ALYRRKDYEN AGLPMLPVTH GEKFTRLHIL LYTVILFAVT LMPFISGMSG
AVYLTSAVLL GAVFLAYAWK IHRDYSDELA RKAFRYSIVY LSLLFAALLV DHYARPLLGV