Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2201 |
Symbol | |
ID | 4092134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 2426621 |
End bp | 2427556 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638015482 |
Product | RNA polymerase factor sigma-32 |
Protein accession | YP_622075 |
Protein GI | 107023748 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.66943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCACG CCCTGACCCT CCCGAACACG CTGAGCCCGA CGCCGGCCAA GGCCGAATCG GCAGGCTCGC TGGCGCTCGC AGCCCAATCG ATGTTGCCCG GCCAGCTCGG CAACATCGAC GCGTACATCC AGGCCGTCAA TCGCATTCCG CTGCTGACCG CCGAAGAAGA ACGCCGCTAC GCAACCGAAT TCCGCGAGGA CAACAACCTC GACGCGGCGC GCCGCCTCGT GCTGTCGCAC CTGCGTCTCG TCGTGTCGAT CGCGCGCAAC TATCTCGGCT ACGGCCTGCC GCACGGCGAC CTGATCCAGG AAGGCAACAT CGGCCTGATG AAAGCCGTGA AGCGGTTCGA CCCGGCGCAA AACGTGCGCC TGGTGTCGTA TGCGATTCAC TGGATCAAGG CCGAGATCCA CGAGTACATC CTGCGCAACT GGCGCATGGT GAAGGTCGCG ACCACGAAGG CGCAGCGCAA GCTGTTCTTC AACCTGCGCA GCCACAAGAA GAGCATGCAG GCGATGACGC CCGAGGAAAT CGACGGCCTC GCGCAGGAGC TCAACGTCAA GCGCGAGGAA GTCACCGAGA TGGAAACGCG CCTGTCGGGC GGCGACATCG CGCTCGAAGG CCAGGTGGAA GACGGCGAGG AGTCGTACGC GCCGATCGCC TACCTGGCCG ACTCGCACAA CGAGCCGACC GCCGTGCTGG CCGCACGTCA GCGCGACATG CTGCAGACGG ACGGCATCGC GCAGGCGCTC GACGCGCTCG ACGCGCGCAG CCGCCGCATC ATCGAGGCGC GCTGGCTGCA CGTCGACGAC GACGGCTCGG GCGGCTCGAC GCTGCACGAT CTCGCCGCCG AGTTCGGTGT GTCGGCGGAA CGCATCCGCC AGATCGAAGC GAGCGCGATG AAGAAGATGC GCACGGCCCT CGCCGAATAC GCGTAA
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Protein sequence | MSHALTLPNT LSPTPAKAES AGSLALAAQS MLPGQLGNID AYIQAVNRIP LLTAEEERRY ATEFREDNNL DAARRLVLSH LRLVVSIARN YLGYGLPHGD LIQEGNIGLM KAVKRFDPAQ NVRLVSYAIH WIKAEIHEYI LRNWRMVKVA TTKAQRKLFF NLRSHKKSMQ AMTPEEIDGL AQELNVKREE VTEMETRLSG GDIALEGQVE DGEESYAPIA YLADSHNEPT AVLAARQRDM LQTDGIAQAL DALDARSRRI IEARWLHVDD DGSGGSTLHD LAAEFGVSAE RIRQIEASAM KKMRTALAEY A
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