Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2175 |
Symbol | |
ID | 4092107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 2401628 |
End bp | 2402293 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638015455 |
Product | OstA-like protein |
Protein accession | YP_622049 |
Protein GI | 107023722 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAC CGTTCCCTCG ACAGATTTCC GGCGGCGCTG CGCGCGCCGT CCGCGCCGCG CTCGCCGCGA CGCTCGTGGC GCTCCCGCTC ATCGGGCTGG CGCCGCTCGC CCATGCCGAG AAGGCCGACC AGAACAAGCC GATCAACGTC GAGGCCGACA ACCTGACCTA TGACGATCTG AAGCAGGTGA CGGTCGCGAC CGGCAACGTC GTGATCACGA AGGGCACGAT CATCATCAAG GGCGACCGCG TCGAAGTGCG CCAGGACCCG GAAGGCTATC AGTACGCGAC GTCGTTCGGC AGCGGCAAGA AGCACGCGAC GTTCCGCCAG AAGCGCGAAG GCCTCGACGA ATACATCGAC GGCGACGCCG AGCGCATCGA CTACGACGGC AAGCAGGATC TCACCACGCT GACCACCGCC GCGACCGTGC GCCGCCTGCA GGGCACGTCG ACGATCGCCG ACACCGTGCA CGGCAGCGTG ATCACGTACG ACGGCCAGCG CGACTTCTAC ACTGCGAAGG GCGGCAAGGA CGTCGCGGCG CCGGGCAACC CGAACGGCCG CGTGCGCGCG ATGCTGTCGC CGAAGAGCGG CGGCCCCGCG CCGCTGAACG GGGCGCCGGC CAAGCTGTCG CCGTCGACCA CGATCCAGGG GGCGCCCGGC CAATGA
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Protein sequence | MNEPFPRQIS GGAARAVRAA LAATLVALPL IGLAPLAHAE KADQNKPINV EADNLTYDDL KQVTVATGNV VITKGTIIIK GDRVEVRQDP EGYQYATSFG SGKKHATFRQ KREGLDEYID GDAERIDYDG KQDLTTLTTA ATVRRLQGTS TIADTVHGSV ITYDGQRDFY TAKGGKDVAA PGNPNGRVRA MLSPKSGGPA PLNGAPAKLS PSTTIQGAPG Q
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