Gene Bcen_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2162 
Symbol 
ID4091211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp2387101 
End bp2387631 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content67% 
IMG OID638015442 
Producturacil-DNA glycosylase superfamily protein 
Protein accessionYP_622036 
Protein GI107023709 
COG category[L] Replication, recombination and repair 
COG ID[COG3663] G:T/U mismatch-specific DNA glycosylase 
TIGRFAM ID[TIGR00584] mismatch-specific thymine-DNA glycosylate (mug) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.991286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTGACG CACTCCCCGA CCTCATCGCG CCCCATCTTG ACGTCCTGTT CTGCGGGATC 
AATCCCGGCC TGATCGCGGC CGCGACCGGG CATCACTTCG CGGGAAGAAA CAACCGCTTC 
TGGCGCGTGA TCCATCTCGC GGGCTTCACG CCGACGGAAA TTTCGCCGCG GGACGATCGC 
GAGATTCTCC GTTACGGCTG CGGGCTGACG GCCGTGGTGC CGCGGCCGAC CGCCAGTGCC 
GATCAGCTGT CGCGCGCGGA ATTCGTGGCC GCGGCCGCCG GGTTCGAGCA GAAGGTCGCG 
CATCATGCGC CGCGCTTCGT CGCGTTTCTC GGCAAGGCGG CGTATGCGGC GCTGTCGGGG 
CAACGGGAAG CCGCGTGGGG ATTGCAGCCG TCCCCTATCC AGCAGGCGCG GGTGTGGGTG 
CTCCCCAACC CCAGCGGCAG AAACCTTGCG TTCGGGCTCG ACGATCTGGT CGATGCGTAT 
CATGAGCTTC ATCTCGCCGC GATGAAGGAC CGGCACGATG CGACGCAGTA A
 
Protein sequence
MVDALPDLIA PHLDVLFCGI NPGLIAAATG HHFAGRNNRF WRVIHLAGFT PTEISPRDDR 
EILRYGCGLT AVVPRPTASA DQLSRAEFVA AAAGFEQKVA HHAPRFVAFL GKAAYAALSG 
QREAAWGLQP SPIQQARVWV LPNPSGRNLA FGLDDLVDAY HELHLAAMKD RHDATQ