Gene Bcen_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2081 
Symbol 
ID4091246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2297880 
End bp2299253 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content66% 
IMG OID638015361 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionYP_621955 
Protein GI107023628 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.959861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGA AAGTTTACGT AAAGACCTTC GGCTGCCAGA TGAACGAGTA CGACTCGGAC 
AAGATGGTGG ACGTGCTCAA TGCGGCCGAA GGCCTCGAAA AGACCGACAC GCCGGAAGAC
GCGGACATCA TCCTGTTCAA CACGTGCTCG GTGCGCGAGA AGGCGCAGGA GAAGGTGTTC
TCCGATCTCG GCCGCGTGCG CGAGCTGAAG GAAGCGAAGC CGGGCCTGCT GATCGGCGTC
GGCGGCTGCG TCGCGAGCCA GGAAGGTGCG TCGATCGTGT CGCGCGCGCC GTACGTCGAC
CTCGTGTTCG GCCCGCAAAC GCTGCACCGC CTGCCGCAGA TGATCGACGC GCGCCGCGCG
AGCGGCCGCG CGCAGGTCGA CATCACGTTC CCCGAAATCG AGAAGTTCGA CCATCTGCCG
CCCGCGCGCG TCGAGGGGCC GAGCGCGTTC GTGTCGATCA TGGAAGGCTG CTCGAAGTAC
TGCAGCTACT GCGTGGTGCC GTACACGCGC GGCGATGAAG TGTCGCGCCC GCTCGACGAC
GTGCTGACCG AAGTGGCCGG CCTCGCCGAC CAGGGCGTGC GCGAAGTCAC GCTGCTCGGC
CAGAACGTGA ACGCCTACCG CGGCGCGCTG ACGGCCGGGT CGACCGACAT CGCCGATTTC
GCGACGCTGA TCGAATACGT CGCCGACATC CCCGGCATCG AGCGGATCCG CTACACGACG
TCGCACCCGA AGGAATTCAC GCAGCGCCTG ATCGACACGT ACGCGAAGGT GCCGAAGCTC
GTGAGCCACC TGCACCTGCC GGTCCAGCAC GGCTCCGACC GCATCCTGAT GGCGATGAAG
CGCGGCTACA CGGTGCTCGA ATACAAGTCG GTGATCCGCA AGCTGCGCGC GATCCGCCCC
GACCTGTCGC TGTCGACCGA CATGATCGTC GGCTTCCCCG GCGAGACCGA GGACGATTTC
GACAAGATGA TGGCGCTCGT GCACGAGATG GGCTACGACA CCAGCTTCTC GTTCATCTAC
AGCCCGCGCC CCGGCACGCC GGCCGCAAAC CTCGCCGACG ACACGCCGCG CGAAGTGAAG
CTCAAACGCC TGCAACATCT GCAGGCGACG ATCGAGGAGA ACGTCGCGCG CATCAGCCAG
TCGATGGTGG GGAAGGTCGA GCGAATCCTC GTCGAGGGCC CGTCGCGCAA GGACCCGAAC
GAGCTCGCGG GCCGCACCGA GAACAACCGC GTGGTGAATT TCCCGGCGCC GCTCGCGTCG
CACCCGCGCC TGATCGGCCA GATGATCGAC GTGAAGATCA ACCATGCGTA CCCGCACTCG
CTGCGCGGCG AGCTCGTGCT CGTCAGCGAC GACGCGAGCA CGGCCACCCA CTGA
 
Protein sequence
MTKKVYVKTF GCQMNEYDSD KMVDVLNAAE GLEKTDTPED ADIILFNTCS VREKAQEKVF 
SDLGRVRELK EAKPGLLIGV GGCVASQEGA SIVSRAPYVD LVFGPQTLHR LPQMIDARRA
SGRAQVDITF PEIEKFDHLP PARVEGPSAF VSIMEGCSKY CSYCVVPYTR GDEVSRPLDD
VLTEVAGLAD QGVREVTLLG QNVNAYRGAL TAGSTDIADF ATLIEYVADI PGIERIRYTT
SHPKEFTQRL IDTYAKVPKL VSHLHLPVQH GSDRILMAMK RGYTVLEYKS VIRKLRAIRP
DLSLSTDMIV GFPGETEDDF DKMMALVHEM GYDTSFSFIY SPRPGTPAAN LADDTPREVK
LKRLQHLQAT IEENVARISQ SMVGKVERIL VEGPSRKDPN ELAGRTENNR VVNFPAPLAS
HPRLIGQMID VKINHAYPHS LRGELVLVSD DASTATH