Gene Bcen_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2078 
Symbol 
ID4091243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp2294509 
End bp2295195 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content71% 
IMG OID638015358 
ProductXRE family transcriptional regulator 
Protein accessionYP_621952 
Protein GI107023625 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.205935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCAT CCCTGGCGCT CGTGCGCGAC GTGTCTTCCT TCGAGTCCGG CAATGCCGCC 
GACGGGCGCG GCTCCGCGTC GCTCGACGTC CTCGAGCAGG TCGTCGGCGT GAATCTCGCG 
CGCTTGCGCG CCGAGCGGCA ACTGTCGCTC GATGCGCTCG CGCGGCTGTC CGGCGTGTCG 
CGCGCGATGC TCGCGCAGAT CGAATCGGCG CGCAGCGTGC CGTCGATCAA GGTGCTCTGC 
AAGATCGCGG CGGCACTGAA GGTGTCGGTC GCCGCGTTCC TGCGGCGCCA TGCGGTGAAC 
GGCTTCGAGC ATCTGGCGGC CGAGCGCGCG TCGCGCGTGG TCAGCTCGAA CGGCCGTTTC 
TCGGCACGTG CGCTGTACCC GGAAGGCGAG CCGGCCGCGG CCGAATTCCA CGAGCTGCGG 
ATCGCACCGC TGCATACGGA GCCCGGCGCG CGCCGCGCGC CCGGCACGAC GGTCAACCTG 
GTCGTCAGCG AAGGCACGCT CGAAGTCAGC GTGCACGACC GCCGCCAGTT GCTCGCGACC 
GGCGACGCGA TCGTGTTCGA CGCCGACCAG CCGTACAGCC TGCGCAATCC GGGCGACAGC 
GAAGCGCGCG CGTTCCGCGT GACAGTGAGC CCCGAGGTGC CGCCGCGCTG GCTCGTGCCC 
GACGCGGCGC ACGCCGCCGT CAACTGA
 
Protein sequence
MSSSLALVRD VSSFESGNAA DGRGSASLDV LEQVVGVNLA RLRAERQLSL DALARLSGVS 
RAMLAQIESA RSVPSIKVLC KIAAALKVSV AAFLRRHAVN GFEHLAAERA SRVVSSNGRF 
SARALYPEGE PAAAEFHELR IAPLHTEPGA RRAPGTTVNL VVSEGTLEVS VHDRRQLLAT 
GDAIVFDADQ PYSLRNPGDS EARAFRVTVS PEVPPRWLVP DAAHAAVN