| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2072 |
|---|
| Symbol | |
|---|
| ID | 4091236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 2288263 |
|---|
| End bp | 2289327 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638015352 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_621946 |
|---|
| Protein GI | 107023619 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.538239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGTG AATCCGGGCC GCGCTGGCGC AAGCGCACCG CGCGCTTCGA CGAGATCGCG
GCGCTCGCCG GCGTCAGCAC GACGACCGTC GACCGCGTGC TGAACGAGCG CGGCAGCGTC
TCCGCGCAGG CGCGCGAACG CGTGGTGGCG GCCGCGCGGC AACTCGGCGT GCCGCGGCAG
TTGCCCGACA CGCGGCACGG GTTGATCCAC GTCGACGTGC TGCTGCCGGA CACCGACGCG
CCGTTCTTCC GACGATTGCA GCAGGCGCTG CAGCGCTCGC TGCAGATGCT CGACCGGCGC
GTGGTCGTGC ACCGGACGAT CCTGCCCGCC GCGGACGACG CACGCGCCGC CGCGCTGATC
GAACGGCCCG CGTACCGGCG CGCGGCGCTG ATCGTCACCG CGCACGACAC GGCCCGCGTG
CGTGACGCAC TGGCTGCCGC GATCGCGCGG GGCGAGACCG TCGTCACAAT GGTCACCGAC
ATCGGCGGCA TCGACCGCGC GCACTTCGCC GGCATCGACA ACTATCGCGC CGGGCGCACG
GCCGGCTACT ACATCGGCCG CCTCGCCGCA CGCCCCGGCC GCGTGCTGCT GCTCGGCGGC
CGGATGGGCT ACCGCGCGCA CGCCGACCGG ATGGCCGGCT GCCGCGATCA GCTCGCCGAC
GCGTTCGCCG CCGTGCGCTG CGACGATGAA CCGATCGAGA CGCTCGACCA GGACGACCGC
TGCTACCGCG CGGTGTCGAA GGCGCTGCAG GCGCACGACG ACGTGGTCGC GATCTACAAC
AGCGGCGCCG GTTCGGCCGG CATCGAAGCG GCGCTGCGCA AGGCCGGCGC GATCGGGCGC
GTGGTGTGGA TCGGCCACGA GATGATCGAC CAGCACCGTA CCTTCATCGA AGCCGGCGCG
ATGGATCTCG CGATCGACCA GGACCCGGAC GGACAAGCGA TTTCCGCGCT GCAGCACGTG
CTGCATGCGT GCGGCATCGT CGAACAGCCG CCGCCGGACG ACCCGGTCGA ATTCCGTGTG
TTCTGTCCGG CGAACGTGAG GACGAGCGCA TACCTGCAGG CGTGA
|
|---|
| Protein sequence | MAGESGPRWR KRTARFDEIA ALAGVSTTTV DRVLNERGSV SAQARERVVA AARQLGVPRQ
LPDTRHGLIH VDVLLPDTDA PFFRRLQQAL QRSLQMLDRR VVVHRTILPA ADDARAAALI
ERPAYRRAAL IVTAHDTARV RDALAAAIAR GETVVTMVTD IGGIDRAHFA GIDNYRAGRT
AGYYIGRLAA RPGRVLLLGG RMGYRAHADR MAGCRDQLAD AFAAVRCDDE PIETLDQDDR
CYRAVSKALQ AHDDVVAIYN SGAGSAGIEA ALRKAGAIGR VVWIGHEMID QHRTFIEAGA
MDLAIDQDPD GQAISALQHV LHACGIVEQP PPDDPVEFRV FCPANVRTSA YLQA
|
|---|
| |