Gene Bcen_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2020 
Symbol 
ID4091259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp2230705 
End bp2231628 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content65% 
IMG OID638015299 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_621894 
Protein GI107023567 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATGG CCGACCGCGA CGGCAAGATC TGGATGGACG GCAAGCTGAT CGACTGGCGC 
GACGCCAAGA TCCACGTCCT GACCCACACG CTGCATTACG GCATGGGCGT CTTCGAGGGC 
GTGCGCGCGT ACAAGACGGC CGACGGCGGC ACCGCGATCT TCCGTCTGCG CGAGCACACC 
AAACGTCTGC TGAACTCCGC GAAGATCTTC CAGATGGACG TGCCGTTCGA CCGCGAAACG 
CTCGAAGCCG CGCAACTCGC GGTCGTGCGC GAGAACCGGC TCGAGTCGTG CTACCTGCGC 
CCGATCATCT GGGTCGGCTC GGAAAAGCTC GGCGTGGCCG CGAAGGGCAA CACGATCCAC 
GTCGCGATCG CCGCATGGCC GTGGGGCGCG TACCTCGGCG AGGACGGCCT CGCGAAGGGC 
ATCCGCGTGA AGACGTCGTC GTTCACGCGC CACCACGTGA ACGTGTCGAT GGTGCGCGCG 
AAGGCGTCGG GCTGGTACGT GAACTCGATC CTGGCGAACC AGGAAGCGAC GGCCGACGGC 
TACGACGAGG CGCTGCTGCT CGACGTCGAC GGCTACGTGT CGGAAGGCTC CGGCGAGAAC 
TTCTTCCTCG TGAACAACGG CAAGCTGTAC ACGCCCGACC TGTCGTCGTG CCTCGACGGC 
ATCACGCGCG ACACGGTCAT CACGCTCGCG AAGGACGCCG GCATCGAGGT CATCGAGAAG 
CGCATCACGC GCGACGAGGT CTACACGGCC GATGAAGCGT TCTTCACCGG CACGGCCGCC 
GAAGTCACGC CGATCCGCGA ACTCGACAAC CGCACGATCG GCAGCGGCGC GCGCGGCCCC 
GTCACGGAAA AGCTCCAGTC GGCGTTTTTC GATATCGTGT CGGGCAAGAA CGCGAAGTAC 
GCGCACTGGC TGACGAAGGT CTGA
 
Protein sequence
MSMADRDGKI WMDGKLIDWR DAKIHVLTHT LHYGMGVFEG VRAYKTADGG TAIFRLREHT 
KRLLNSAKIF QMDVPFDRET LEAAQLAVVR ENRLESCYLR PIIWVGSEKL GVAAKGNTIH 
VAIAAWPWGA YLGEDGLAKG IRVKTSSFTR HHVNVSMVRA KASGWYVNSI LANQEATADG 
YDEALLLDVD GYVSEGSGEN FFLVNNGKLY TPDLSSCLDG ITRDTVITLA KDAGIEVIEK 
RITRDEVYTA DEAFFTGTAA EVTPIRELDN RTIGSGARGP VTEKLQSAFF DIVSGKNAKY 
AHWLTKV